| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1405 |
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| Symbol | |
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| ID | 4258574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1624150 |
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| End bp | 1626513 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638122039 |
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| Product | protein of unknown function DUF940, membrane lipoprotein putative |
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| Protein accession | YP_737461 |
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| Protein GI | 114046911 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0951062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACT CGACTCCCAC TTTGCATGCG TTCGGGCGTT TATCAGCGCT GTCCTTAGCA
CTGCTACCTT TATTACATGT TAACGCCGAT GAATTTTCCT ATCCCACACT GTTACCATCA
CAGTCAGATT TTGGTGGTGT TGGGCTAATG CAGATGCCAA CAGGACGTAT GGCACCTGAA
GGTGAATTTA ACTTTGCCAC TACTTACAAC GATGACTATC AACATTTTAG CGCTTCAGTG
CAGCTCTTCC CTTGGTTTGA AACCACTATT CGCTACACCT TAGTACAAGA CCTGCTTTAC
AGTAGCGATC CTAGCTTTAG TGGTAATACT AAATACACGG ATAAAGGGAT CGATTTTAAG
ATTCGTCTAC TCGAAGAAAG TAACTGGCTC CCTGAAACCT CCATTGGCGT GCGAGACTTT
GGTGGTACAG GTTTATTTGA TGGTGAATTT ATTGCTGCGA CAAAGCGCGT CGGTCCACTC
GATTTTACTC TAGGTATAGG TTGGGGCTAT ATTGGCAATA GCGGTAATCT CACTTCCGAT
AAAAAAGATC TTAATTACAA CTGTGATAGA GATACTTCTT ATGGGGGTAA AGGTGGCACT
GTTGATTATC AGCGTTGGTT TAAAGGCTGC GCGGCACTCT TTGGTGGCGT TGAATACCAA
ACTCCTTGGG AGCCACTTCG CTTAAAAGTC GAATACGATG GTAACGACTA TCAATCAGAT
TTCCCAGTGG TTCGTGGTGG CATAGCCATG CCACAGGACA GCAAATTTAA CTATGGAATG
CTTTATCGCT TTGGGGATTG GGGCGATCTA CATTTAAGTT ATGAGCGCGG TAATACGTGG
ACGCTCGGTT TTAGTCTGCA AACAAATTTT AATACCTTGT CGCAGATTAA ACGTGATCCA
GAGGCCGCAA AATATAAACC GCTTCCTGCT GCGCCATTAA CGCATAGTCC GACAGAAACA
TCTAGACAGG CAGACACGAC TAAATCCGCA CAAGATATTG AAAATGTAAA AGCTTTATCA
GTAAAAGATG ACGAAGCGCA AGGTTCCGAC CTCTTATCTG CCTCATATCA AACCATGCCT
GATACTAAAG TGGATTGGAA TAAAGTTGCT CAGGATTTAC AAACTATTGC TGGTTACGCA
AACGCAAAAA TTTACCTTGA TAATGAAAGC ATTACCGTTG TAGGTGAACA GACAAAATTC
CGCGATAGAA ATGAAGCGCA TAAAAGAGCT GCCACCATTC TTGCCAACAA TACTGATGCC
AACTTTATTA AAGAGTATCG ACTAATTGAG ACTCGTTATA GTCAACCTAT AACGGAAACC
CGCATTGATG CCCAGAAGTT TGCCCAAGTC GCAAGTTATG GCTACCTCAA TGCCAAAGTC
ACCGATGCAA CTGTAGTGAG TATCCCAAGC TTACCTCATG GACAACTAGT AAATAATACT
GATAAAGATT GGTTAGATAA GCTTAGTTTT GATGTTTCGC CCACCATGTC CCAATCCTTC
GGCGGTTCCG AAGGGTTTTA TATGTTTAGT ATTGGAATGA CAGGTAGTGC AAGTTACCGC
TTTACCGATA ACTTTGAGTT TTCAAGCTCT CTGTATCTTA ACCTCTACGA TAACTTTGAT
AAGTTTTTAT ACGAAGTTCC ACCCGATGGC ACTGACTTAA AACGTGTTCG CACCCTAGTT
CGTCAATATA TTCATGATAA TCCAGTTCGG GTGAATAACC TGCAACTGAC TTGGATGGAT
AATTTAACCG ACAACATTTC TTTCCAAGCC TACGGCGGCT ATTTAGAAAT GATGTATGGT
GGTGTGGGCA CAGAGGTTCT CTATCGACCA CTTAACAGTC AATGGGCCTT CGGTGTCGAT
ATGAATTATG TCAAACAACG TGATCCAGAC AGCATGCTAG GCTTCTTTGA TGATGAGCAT
CAATTTGACT CACTCACTAA CCGCCCCTAT CGAGTGCAAA CGGGTACAAT AACAGGTCAT
GCATCTGTCT ATTATCAACC TGACTGGTTC CCCAATACCT TATTAAGGAT CAGTGCAGGC
CAGTATTTAG CCGAGGATAA AGGAGTAACG GTTGATTTCT CCAAACAATT CGATAGCGGT
GTGATTGTTG GTGCTTTCGC CACTAAGACT AATCTTTCAT CAGATGAGTA TGGTGAGGGC
AGTTTTACTA AAGGCTTCTA CGTGTCGATT CCATTTGACT TGATGACCAT TAAATCAACC
CATAGCAGTG CGACAATCAG TTGGATGCCG CTGACACGCG ATGGTGGTCA AACATTAGGT
CGCAAGTACA GTCTATATGA TGTAATGGAT GCTAGAGATC CTTGGTTCAC ACGTGCAAGC
ATCACAAGTG AGTCTGTCAA ATAA
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| Protein sequence | MKNSTPTLHA FGRLSALSLA LLPLLHVNAD EFSYPTLLPS QSDFGGVGLM QMPTGRMAPE
GEFNFATTYN DDYQHFSASV QLFPWFETTI RYTLVQDLLY SSDPSFSGNT KYTDKGIDFK
IRLLEESNWL PETSIGVRDF GGTGLFDGEF IAATKRVGPL DFTLGIGWGY IGNSGNLTSD
KKDLNYNCDR DTSYGGKGGT VDYQRWFKGC AALFGGVEYQ TPWEPLRLKV EYDGNDYQSD
FPVVRGGIAM PQDSKFNYGM LYRFGDWGDL HLSYERGNTW TLGFSLQTNF NTLSQIKRDP
EAAKYKPLPA APLTHSPTET SRQADTTKSA QDIENVKALS VKDDEAQGSD LLSASYQTMP
DTKVDWNKVA QDLQTIAGYA NAKIYLDNES ITVVGEQTKF RDRNEAHKRA ATILANNTDA
NFIKEYRLIE TRYSQPITET RIDAQKFAQV ASYGYLNAKV TDATVVSIPS LPHGQLVNNT
DKDWLDKLSF DVSPTMSQSF GGSEGFYMFS IGMTGSASYR FTDNFEFSSS LYLNLYDNFD
KFLYEVPPDG TDLKRVRTLV RQYIHDNPVR VNNLQLTWMD NLTDNISFQA YGGYLEMMYG
GVGTEVLYRP LNSQWAFGVD MNYVKQRDPD SMLGFFDDEH QFDSLTNRPY RVQTGTITGH
ASVYYQPDWF PNTLLRISAG QYLAEDKGVT VDFSKQFDSG VIVGAFATKT NLSSDEYGEG
SFTKGFYVSI PFDLMTIKST HSSATISWMP LTRDGGQTLG RKYSLYDVMD ARDPWFTRAS
ITSESVK
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