| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1404 |
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| Symbol | |
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| ID | 4258573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1623582 |
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| End bp | 1624124 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638122038 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_737460 |
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| Protein GI | 114046910 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0684002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGCA TTGAAACCGA GCTTGCAGAA GTATTGGTGT TCGAACCTCA AGTATTTGGT
GATGAACGCG GTTTTTTTAT GGAAACTTTT AGACAATCGT TTTTTTCCGA GTGTTTGAAA
AATAGAGGGT TAGATGCGCT GGAGTTAGTC CAAGATAACT TTAGCCGATC ACAACAACAC
GTATTACGTG GCTTGCATTA CCAATGCAAG TATCCGCAGG GGAAATTAGT CCGGGTGTGT
GCTGGCAGTA TTTTTGATGT TGCAGTGGAT ATTAGGCCGC AATCAGGAAC CTATGGTAAA
TGGGTAGGGC GTGTACTTTC TGCTGATAAC CATTTGCAAA TGTGGATCCC GCCTGGCTTT
GCCCATGGTT TTTATGTGCT GAGTGAATAT GCCGATGTGA TTTATCGCTG CACTGATTAT
TACGCGCCAG ATGATGAATA TGTGTTGGCT TGGAATAGTG CTGAGTTTGC CATTGACTGG
CCGGTACACA ACGAACCACC AATACTTTCG GAGAGGGATG CAAAAGCCGC CGTGAGTACC
TAG
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| Protein sequence | MKCIETELAE VLVFEPQVFG DERGFFMETF RQSFFSECLK NRGLDALELV QDNFSRSQQH
VLRGLHYQCK YPQGKLVRVC AGSIFDVAVD IRPQSGTYGK WVGRVLSADN HLQMWIPPGF
AHGFYVLSEY ADVIYRCTDY YAPDDEYVLA WNSAEFAIDW PVHNEPPILS ERDAKAAVST
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