| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1382 |
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| Symbol | |
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| ID | 4257275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1598856 |
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| End bp | 1601369 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638122016 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_737438 |
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| Protein GI | 114046888 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0357414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTACAAC AATTCAAAAA ATACATCAAA GCGGTTCCCA AAACCGCAAT ATTAGTTGGC
ATCACTGCCA CGATATTGAT GGGCACACAG GCGCAAGCTA TTACGCCCTC TCCGCAGATG
ATAGAGCAAT TCAAACAACT ACCTAAGTCA GAGCAAGAAC GTTTAGCTCG CCAATACGGT
ATTGATCCGT CAATGATCAC GGGGGCCTCA ACTACTGCTA CTGCTGTTGA AAACCCAACT
GTAGTTACGC CACGAACGGA AAGTGGTAAT AACGTCATCG ATCAATCTGA GGACGATAAA
CTTAACCAGG CAACCAAAAC GGAAGCTAAG GTTGAAGCGA TTGAAAGCAA AAAAGAAGAT
CAGCTAAAAC GCTTTGGCTA TGACTTATTT GCTGGTTCTC CAAGTACGTT TGCTCCCGTT
TCTGATGTAC CAGTGCCTGC TGAATACATG ATGGGTCCCG GTGATACCTT AAATGTGCAG
TTTTTTGGTA AAGAAAATAA TCAGTTCACA TTAACCGTGG GCCGTGATGG CGCGGTTCAA
TTTCCAAACT TGGGGCCTAT CTCACTAGTA GGCTTAACCT TTGCTGAAAC ACGCGAGTTA
TTACAGCAAA AGATCAGCCA AAGCATGATA GGTATTGAGT CCAATATCAC TATGGGTGAG
TTGCGTTCAA TCCGGATTTT TGTTGCCGGT GACGCTTACA AGCCTGGCTC CTATACTGTA
TCGAGCTTAT CCACTATTAC CCAAGCCTTG TTTATCTCGG GTGGTGTGAA CGAAATTGGT
AGCTTGCGTG ATATCCAATT AAAGCGCTCT GGTAAAACTA TTGGCCGTTT AGACTTGTAT
GATTTATTGC TTCGCGGCGA TGCTTCGGGC GATATGCGAT TACAATCCGG TGATGTGGTC
TTTGTTCCAT CTACAGGGGG CACTGTGAGT GTCATTGGCG AAGTGCGTCG CCCTGCCATT
TACGAGCTTA AAAATAATGA GACCATGGCC GATGTGATTA ATATGGCCAG TGGCTTAAAC
CCTGGTGCTT ATCCTAAAGC CAGTACTATC GAACGTTATA GTCGTGAAGC GGTAAAAACC
GTGGTAAGCG TAGATTTAAC CGAAAATTCA GGCTTAAGTA CGTTAGCAAA AAATGGTGAC
TTACTTAATG TGCGCTCAGC TTCAAGCCGT ATTGATAATG CCATTACAGT GTCTGGTGCT
GTAATACGCC CTGGTAAATA TCAATGGACA AATGGTCTAA CAGTTGCCGA TTTATTGCCT
TCAATTTGGG GGGATTTAAC CATCTCCGCC GACTTGGATT ACAGTCTACT CGTTCGAGAA
ATCAACCAAC GGGGTGATAT TGAAGTTGAG CGTATCAACC TCGGGCGTGC CATCGGTGAA
CCAAAATCGC ATTATAATCT TGCGCTAAAG CCACGAGATT CAGTCATCGT ATTTGACTAT
GCAGATCGTG AGGAGCTGCT TAAGCCCATT ATTAAAAAGT TAAAAGAGCA AAGCCGTTTT
GGTGATGCAG CGAAGCTAGT TAATATCAAT GGTAATGTGC GTTTTCCTGG CCAGTATCCA
ATAACGGTTA ATGCCGATGT TAAAGATTTA CTTATAGCTG CAGGCGGGCT AGAAGAAGGT
GCATATACCT TATCTGCAGA GCTCACTCGC CAACAAGTGT CTGAGCAAAA CGGTGTCACA
GTAGAACATG TGCAGCTTAG TTTAGACCGC GTTATGCAAA ATGATCCGGC TGCCAATATC
AAACTGCAAA GCCGTGACAT ATTAACCGTA CGTACGTTGC CAGACTGGCA AGAAACTCGC
TGGGTCACCA TTAAAGGTGA AGTCAAATTC CCCGGTACTT ACAGTATCCA GCGCGGCGAA
ACCTTAAAAC AAGTGCTTGC TCGTGCAGGG GGGATGACGA GTGATGCTGC ACCCCGCAGT
GCAGTCTTTT TGCGCAAATC TATTCAAGAG AAAGAACAGC AAGAGCTTGC TAAGCTTGCC
GATGAGTTGC GCCGTGAGAT TGCAGCAAAA GCCTTAACCA AAGACACGCC TACCGTTGGT
TATAACGATG CACAAATGAT GTTAAATCAG TTGGAAAACG TTAAAACGGT TGGTCGTTTA
GTTGTCGATA TCAATGCGAT TGAATTAGGT ATCGAAAGTG CCGATTTAAT GCTAGAAGAT
GCAGATGCAC TCTACATTCC ACCTGCTAAC CAGACGGTTT CTGTTATGGG CCAAGTGCAA
CACCCAAGCA CTCATCGCTT TAAAACTGGT CTAACCTACG AACAGTATCT AGCGTTATCC
GGTGGGGCAC GTAAACGCGC TGACGAATCA CGCACTTATA TATTAAAAGC CGATGGCTCG
GTACAAATGC CTGAATCTTC ATTGTGGTTT ACTGGCGGTA GCTCAATGGA ACCAGGTGAC
ACCATAGTTG TACCATTGGA TACCGAATAC AAAGATAATC TAACGTTGTG GACTCAAGTA
ACGAGCATTA TCTACAACAC CGCCGTCGCA GTATCCGCAA TATCGGGGAT TTAG
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| Protein sequence | MLQQFKKYIK AVPKTAILVG ITATILMGTQ AQAITPSPQM IEQFKQLPKS EQERLARQYG
IDPSMITGAS TTATAVENPT VVTPRTESGN NVIDQSEDDK LNQATKTEAK VEAIESKKED
QLKRFGYDLF AGSPSTFAPV SDVPVPAEYM MGPGDTLNVQ FFGKENNQFT LTVGRDGAVQ
FPNLGPISLV GLTFAETREL LQQKISQSMI GIESNITMGE LRSIRIFVAG DAYKPGSYTV
SSLSTITQAL FISGGVNEIG SLRDIQLKRS GKTIGRLDLY DLLLRGDASG DMRLQSGDVV
FVPSTGGTVS VIGEVRRPAI YELKNNETMA DVINMASGLN PGAYPKASTI ERYSREAVKT
VVSVDLTENS GLSTLAKNGD LLNVRSASSR IDNAITVSGA VIRPGKYQWT NGLTVADLLP
SIWGDLTISA DLDYSLLVRE INQRGDIEVE RINLGRAIGE PKSHYNLALK PRDSVIVFDY
ADREELLKPI IKKLKEQSRF GDAAKLVNIN GNVRFPGQYP ITVNADVKDL LIAAGGLEEG
AYTLSAELTR QQVSEQNGVT VEHVQLSLDR VMQNDPAANI KLQSRDILTV RTLPDWQETR
WVTIKGEVKF PGTYSIQRGE TLKQVLARAG GMTSDAAPRS AVFLRKSIQE KEQQELAKLA
DELRREIAAK ALTKDTPTVG YNDAQMMLNQ LENVKTVGRL VVDINAIELG IESADLMLED
ADALYIPPAN QTVSVMGQVQ HPSTHRFKTG LTYEQYLALS GGARKRADES RTYILKADGS
VQMPESSLWF TGGSSMEPGD TIVVPLDTEY KDNLTLWTQV TSIIYNTAVA VSAISGI
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