| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1378 |
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| Symbol | |
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| ID | 4257271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1593428 |
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| End bp | 1594213 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638122012 |
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| Product | VacJ family lipoprotein |
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| Protein accession | YP_737434 |
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| Protein GI | 114046884 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0433853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.313356 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTGA AATGGCTAGG GGTACTTTTA GGATTTGCAC TACTGCCTAA GGTGTATGGG
GCAGAAGCGA CAGTGCCCGA TACTACTCCA AAGGAAACGG CTTCAGCAGT AAAGATTACT
TACGATGATC CTCGAGATCC CCTTGAGGGA TTCAACCGTG CAATGTGGGA CTTTAACTAT
CTGTATTTAG ATAGATATAT TTATCGTCCT ATCGCCCATG GATACAACGA TTACCTGCCA
TTGCCCGCAA AAACGGGGAT AAATAACTTC GTACAGAATT TGGAAGAGCC CAGTAGTCTC
GTTAACAATG CCTTACAGGG TAAATGGGGT TGGGCGGCCA ATGCCGGCGG ACGTTTTACG
GTCAATACGA CAATCGGCTT GCTCGGCGTG TTCGATGTGG CTGATATGAT GGGGATGCCA
CGTAAGCAAG ATGAATTTAA CGAAGTTTTA GGTTACTACG GTGTGCCGAA TGGGCCGTAT
TTTATGGCGC CTTTTGCCGG TCCTTACGTA GTGCGAGAAC TCGCATCGGA TTGGGTTGAT
GGTCTATACT TTCCACTATC TGAGCTAACA GTGTGGCAAT CCATTGTTAA ATGGGGACTT
AAGAGTCTTC ATGCGAGAGC GTCAGCGATT GACCAAGAAA GGCTTGTTGA TAATGCGCTC
GATCCCTATA CCTTCGTGAA AGATGCGTAC TTACAACACA TGGACTATAA AGTCTATGAT
GGCAATGTTC CTCAAAAACA AGAAGATGAT GAGTTGCTCG ATCAGTACAT GCAGGAACTT
GAGTAA
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| Protein sequence | MKLKWLGVLL GFALLPKVYG AEATVPDTTP KETASAVKIT YDDPRDPLEG FNRAMWDFNY
LYLDRYIYRP IAHGYNDYLP LPAKTGINNF VQNLEEPSSL VNNALQGKWG WAANAGGRFT
VNTTIGLLGV FDVADMMGMP RKQDEFNEVL GYYGVPNGPY FMAPFAGPYV VRELASDWVD
GLYFPLSELT VWQSIVKWGL KSLHARASAI DQERLVDNAL DPYTFVKDAY LQHMDYKVYD
GNVPQKQEDD ELLDQYMQEL E
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