Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1368 |
Symbol | |
ID | 4257733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1583226 |
End bp | 1583963 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638122002 |
Product | chemotaxis phosphatase, CheZ |
Protein accession | YP_737424 |
Protein GI | 114046874 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG3143] Chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.724461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.296544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCAC AAACATCAGG GCTCATTACG CTCGAGAAGG CTCAGCGTTT AGTTGAATTA TTAAGCGCGA ATGAACAAGC TCAAGCAGAT GATTTATTTA GGGAACTCGC GGCTCCACTC CAAAGGGAGC TCTTTGATGA AGTTGGCAAA TTGACTAGAC AACTTCATAG CGCATTAATG GATTTTCAAG TTGACAATCG TTTGGTTGAA CTCGCGAATA CCGAAATTCC CGATGCTAAG GAACGGCTAA GTTATGTCAT CGACATGACA GAACAAGCCG CGAATAAAAC CATGGATGCG GTAGAAGAGT GCTTGCCGCT CGCAAATGCA TTAACGGCGA ATATTCAGCA AGTGATGCCA TCTTGGGATA AGTTGATGCG GCGTGAAATC GCCCTGAGCG ATTTTAAAGC ACTTTGCCAC AATGTGCAGC ATTTGATGTC ACGTAGCGAA TTGGATTCCA ATCGCTTACG CGAATTGCTC AACCAGATTT TGATGGCGCA GGATTTTCAG GACCTGACTG GACAAATGAT CCGGCGGGTG ATCGATCTAG TGATGGAAGT TGAAAGTAAT CTGGTGTCTA TGCTGACAGT ATTTGGTGAG CAACCCGTGA TTGAGAGTCA GATTACTCAG AAAAATAATA TTGAAGCTGA AGGACCGATA ATGAATGCCG AGCTTCGTCA AGACGTCGTT ACCGGTCAAG ATGAAGTCGA TGATCTGCTA TCGAGTCTGG GTTTCTAA
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Protein sequence | MKSQTSGLIT LEKAQRLVEL LSANEQAQAD DLFRELAAPL QRELFDEVGK LTRQLHSALM DFQVDNRLVE LANTEIPDAK ERLSYVIDMT EQAANKTMDA VEECLPLANA LTANIQQVMP SWDKLMRREI ALSDFKALCH NVQHLMSRSE LDSNRLRELL NQILMAQDFQ DLTGQMIRRV IDLVMEVESN LVSMLTVFGE QPVIESQITQ KNNIEAEGPI MNAELRQDVV TGQDEVDDLL SSLGF
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