Gene Shewmr7_1363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1363 
SymbolflhA 
ID4257728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1577702 
End bp1579801 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content48% 
IMG OID638121997 
Productflagellar biosynthesis protein FlhA 
Protein accessionYP_737419 
Protein GI114046869 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1298] Flagellar biosynthesis pathway, component FlhA 
TIGRFAM ID[TIGR01398] flagellar biosynthesis protein FlhA 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.960302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTTA AAGCCTCCCT AGGCCAAGTA AAACAGTTGA AACTGAGCTC TTTCAAGGGC 
ATAGGTACGC CAATGCTAGT GCTTGCGGCA TTGGCTATGA TTGTATTGCC TATCCCGCCG
TTTCTACTCG ACGTTTTATT CTCTTTTAAC ATTGCCTTGG CTTTGATTGT TCTTCTTGTC
GCGATTTATA CCGACAGACC TTTAGATTTT GCTGCTTTCC CAACCGTTTT ATTAGTCGCG
ACACTGCTGC GACTCGCACT TAACGTGGCA TCGACCCGTG TAGTATTACT CGAAGGCCAT
AATGGTGGTG ACGCCGCCGG TAAGGTGATT GAGGCCTTCG GCTCAGTGGT GATTGGCGGT
AACTATGCAG TGGGTTTGGT CGTATTTATC ATCTTGATCA TTATCAACTT TGCCGTTGTG
ACTAAAGGTG CAGGCCGTAT TGCCGAGGTG AGTGCTCGCT TCACCTTAGA TGCGATGCCC
GGTAAGCAAA TGGCCATCGA TGCCGACTTG AACGCAGGTA TTATTAATCA GGATCAAGCC
AGAACCAGAC GCGCCGAGGT GACCCGCGAA GCCGACTTCT ATGGCGCAAT GGACGGTGCG
TCTAAGTTTG TAAAGGGCGA TGCGATTGCA GGTATCATGA TCTTAGTTAT CAACATTCTC
GGTGGGTTTA TTATCGGGAT TGTGCAGCAC GGTTTGACAT TCTCCCAAGC TGTTGAAATT
TATACCCTGT TAACCATTGG TGACGGTCTC GTCGCGCAAA TTCCCGGCCT GTTGTTGTCA
ATTGCTGCGG CGTTGATGGT GACCCGTCAA AATGAATCTG GCGATATGGG CCAGATGTTG
ATTAGTCAGA TGTTTGACAG TCACAAGTCA CTCAGTATTG CGGCCGGCGT ACTCTTTGTC
ATGGGTATTG TGCCAGGCAT GCCACACATG GCGTTTTTAA GCTTTGCCGT GATCACAGGT
GGTGCCGCTT ACTTTATATT TAAACGTAAT GAAGCCAAAC GTGCCAAAGC CCTTGAGCAA
GTCAAAACGG GCCCAGCGGA AAGAGCCGAA AGAGAACCTA AAGAACTTAG CTGGGACGAT
GTGCACCATG TTGACACTAT CGGTCTGGAA GTGGGTTATC GTTTGATCCC ATTAGTCGAT
AAAGGGCAAG GTGGTGAATT ACTAAGTCGG ATCAAAGGGG TACGTAAAAA GCTTTCTCAA
GAGCTGGGCT TCTTGGTGCC TGCGGTACAT ATTCGTGACA ACCTCGATTT ATCACCCAAT
GCCTACCGCA TCTCGTTAAT GGGCGTGGTG GTTGGAGAGG CGGATATTCG CCATGACTGC
GAACTCGCCA TCAACCCAGG CCAAGTTTAC GGTAAGCTCG ATGGTATCGA AACGCGTGAT
CCTGCCTTTG GTCTCGAAGC CGTGTGGATT GCCCCAGAGC TGCGTGAACA TGCACAAACC
TTAGGTTATA CCGTGGTGGA TGCCGCGACG GTGGTAGCAA CCCATATCAG CCAAATATTG
ACGAATAACG CGGCGAAACT CTTAGGCTAC GAAGAAGTGC AACAACTGAT GGATATGCTT
GCCAAGCATT CGCCTAAGCT GGTGGATGGC TTTATTCCTG ATGTGATGCC GCTCGGAAAT
GTCGTAAAAG TGATGCAAAA CCTATTAAAT GAAGGAGTTT CTGTCAGAGA CTTGCGTACC
ATAGTGCAAA CTTTGTTAGA ATACGGCACT AAGAGTAACG ATACCGAAGT ATTAACGGCC
GCGGTGCGTA TCGCATTGAA GCGCATGATA GTTCAAGAGA TCTCAGGTCC TGAACTCGAA
ATACCTGTCA TAACTTTGGC GCCAGAGTTG GAACAGATGT TGCATCAGTC GATGCAGGCA
ACAGGTGGCG ATGGTCCTAA TATCGAGCCC GGTCTTGCGG AGCGTATGCA GCAATCCTTA
GCGGATGCCG CTCAAAAGCA AGAAATGGTT GGTCAGCCGG CTATTTTGCT AACGTCAGGT
ATGTTACGTG CGACACTGTC TCGCTTTGTT AAATATACTA TTCCTAATCT CAGAGTGATT
TCTTACCAAG AAATCCCCGA TGAAAAGCAA ATACGCATAG TGTCTGCCGT CGGCCAGTAG
 
Protein sequence
MDVKASLGQV KQLKLSSFKG IGTPMLVLAA LAMIVLPIPP FLLDVLFSFN IALALIVLLV 
AIYTDRPLDF AAFPTVLLVA TLLRLALNVA STRVVLLEGH NGGDAAGKVI EAFGSVVIGG
NYAVGLVVFI ILIIINFAVV TKGAGRIAEV SARFTLDAMP GKQMAIDADL NAGIINQDQA
RTRRAEVTRE ADFYGAMDGA SKFVKGDAIA GIMILVINIL GGFIIGIVQH GLTFSQAVEI
YTLLTIGDGL VAQIPGLLLS IAAALMVTRQ NESGDMGQML ISQMFDSHKS LSIAAGVLFV
MGIVPGMPHM AFLSFAVITG GAAYFIFKRN EAKRAKALEQ VKTGPAERAE REPKELSWDD
VHHVDTIGLE VGYRLIPLVD KGQGGELLSR IKGVRKKLSQ ELGFLVPAVH IRDNLDLSPN
AYRISLMGVV VGEADIRHDC ELAINPGQVY GKLDGIETRD PAFGLEAVWI APELREHAQT
LGYTVVDAAT VVATHISQIL TNNAAKLLGY EEVQQLMDML AKHSPKLVDG FIPDVMPLGN
VVKVMQNLLN EGVSVRDLRT IVQTLLEYGT KSNDTEVLTA AVRIALKRMI VQEISGPELE
IPVITLAPEL EQMLHQSMQA TGGDGPNIEP GLAERMQQSL ADAAQKQEMV GQPAILLTSG
MLRATLSRFV KYTIPNLRVI SYQEIPDEKQ IRIVSAVGQ