Gene Shewmr7_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1362 
SymbolflhB 
ID4257727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1576453 
End bp1577583 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content50% 
IMG OID638121996 
Productflagellar biosynthesis protein FlhB 
Protein accessionYP_737418 
Protein GI114046868 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.873498 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAG AAAGTAGCGG CGAACGCAGC GAGGAACCCA CCGGGAGGCG CCTCGAACAG 
GCGCGAGAAA AAGGGCAGGT AGCCCGTTCA AAAGAGTTAG GTACTGCGAC CGTGTTACTC
TCGGCTGCGA CAGGCTTGTA TATGCTTGGG CCTGGGATTG CGAAGGCGCT GTCCAATGTG
TTTGAACGCG TCTTCACCAT GGACCGCGCT GCGATTTTCG ATACGAACCA GATGTTTAAT
GTATGGGGCG TCGTGGGAAG CGAGATTGGC TGGCCGTTAC TCAAGATTAT GTTACTGATT
GTCGTGGTGG CATTTATCGG TAACGTATCC CTTGGCGGGA TGAACTTCTC CACCCAAGCC
ATGATGCCTA AAGCCAGTAA AATGAGCCCG ATTGCGGGCT TTAAGCGGAT GTTTGGTGTG
CAGGCCTTGG TTGAATTAAC CAAAGGGATT GCTAAGTTTT CTGTGGTAGC AATCGCGGCT
TATTTACTAC TCAGTCACTA TTTTAACGAT ATTCTACTCC TGTCAGCCGA TCATCTCCCC
GGTAACGTCC ATCATGCGCT GGATTTGTTA GTCTGGATGT TTATTCTGCT TTGCTCCTCT
GTCTTAGTCA TTGTGGTGAT CGATGTGCCA TTTCAGATCT GGAACCACAA CAAACAGCTG
AAAATGACTA AACAGGAAGT GAAAGACGAG TATAAAGACA CTGAAGGTAA ACCTGAGGTC
AAAGGGCGAG TACGCCAAAT GCAGCGTGAG TTAGCGCAGC GACGCATGAT GGCCGAAGTT
CCCAATGCGG ATGTGATTGT GGTGAACCCT GAGCATTATG CGGTGGCCAT TAAATACGAT
GTGAAGCGCT CTGCAGCGCC TTTTGTTATC GCTAAAGGAG TGGATGAAGT CGCGTTTAAA
ATCCGCGAAG TGGCAAGGGC ACATAACATT GCGATTGTCT CAGCACCACC GCTGGCGCGG
GCAATTTATC ACACCACTAA GCTTGAACAG CAGATCCCAG AGGGCCTATT TACCGCGGTG
GCACAGGTGC TGGCTTATGT GTTCCAGTTA CGCCAGTACC AAAAAGGTCG TGGCCGTAAA
CCTATTCCAA TCCCTGCTAA TCAACCCATT CCTGACGAAC TGAAACACTA G
 
Protein sequence
MAEESSGERS EEPTGRRLEQ AREKGQVARS KELGTATVLL SAATGLYMLG PGIAKALSNV 
FERVFTMDRA AIFDTNQMFN VWGVVGSEIG WPLLKIMLLI VVVAFIGNVS LGGMNFSTQA
MMPKASKMSP IAGFKRMFGV QALVELTKGI AKFSVVAIAA YLLLSHYFND ILLLSADHLP
GNVHHALDLL VWMFILLCSS VLVIVVIDVP FQIWNHNKQL KMTKQEVKDE YKDTEGKPEV
KGRVRQMQRE LAQRRMMAEV PNADVIVVNP EHYAVAIKYD VKRSAAPFVI AKGVDEVAFK
IREVARAHNI AIVSAPPLAR AIYHTTKLEQ QIPEGLFTAV AQVLAYVFQL RQYQKGRGRK
PIPIPANQPI PDELKH