| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1349 |
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| Symbol | fliF |
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| ID | 4255421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1564750 |
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| End bp | 1566435 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638121983 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_737405 |
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| Protein GI | 114046855 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTCG GATCAAACGC CGGCGCAGTG GACCAAGGGG TCCAACAGGA AAATAAATCC
GGCGTGCTGG GGAGTCTCGG TGGCGTCGAT ATGATGCGTC AAATCACCAT GATTTTAGCC
CTCGCCATTT GTTTGGCGTT AGCCGTGTTC GTCATGATCT GGGCACAGGA GCCTGAGTAC
CGTCCATTGG GTAAAATGGA AACTCAGGAA ATGGTGCAAG TGCTCGACGT ACTTGATAAA
AATAAGATCA AGTATCAAAT CGATGTTGAC GTCGTTAAGG TACCCGAAGA CAAATATCAA
GAAGTTAAAA TGATGCTGAG CCGTGCGGGT ATTGATAGTG CCGCGGCCTC AAGCAAAGAT
TTTCTCACCC AAGACAGTGG TTTTGGCGTG AGCCAAAGAA TGGAACAGGC TCGCCTCAAG
CACAGCCAAG AAGAAAACCT CGCCCGCGCA ATTGAACAAC TGCAAAGTGT TAGCCGCGCC
AAAGTGATTT TAGCCCTACC CAAAGAAAAC GTGTTTGCTC GCAACACTGC GCAGCCAAGT
GCGACCGTTG TGATCAACAC TCGCCGTGGT GGTTTAGGCC AAGGCGAGGT CGATGCTATT
GTGGATATCG TCGCTTCCGC CGTTCAGGGC TTAGAGCCAT CTCGCGTGAC AGTTACAGAT
TCTAACGGCC GTTTACTGAA CTCGGGTAGC CAAGATGGCG TATCTGCTAG GGCGCGTCGT
GAGCTTGAGT TAGTTCAACA GAAAGAAGCC GAATACCGCA CTAAAATTGA CTCTATTTTA
TCGCCCATTC TCGGGCCTGA TAACTTCACT TCTCAAGTAG ATGTGAGCAT GGATTTCACT
GCGGTCGAGC AAACCGCTAA GCGCTTCAAC CCCGACTTAC CGTCGCTGCG TAGCGAAATG
ACGGTCGAGA ATAATTCGAC TGGCGGTTCA ACTGGCGGCA TTCCTGGTGC CTTATCGAAT
CAACCCCCAA TGGAATCTAA TATTCCGCAG GAAGCAGATA AAGCGACGGA AAGTGTTACT
GCTGGTAACT CCCACCGCGA AGCGACCCGT AATTTTGAAC TCGATACCAC CATCAGCCAT
ACCCGTCAGC AAATTGGCGT GGTGCGCCGC GTGAGTGTGT CGGTTGCGGT GGACTTTAAA
CCGGGGGCGG CTGGGGAAAA TGGCCAAGTG GCGCGCGTTG CCCGTACCGA GCAGGAGCTA
ACCAATATTC GCCGTTTACT GGAAGGCGCG GTAGGCTTTA GCGCGCAGCG TGGTGATGTG
CTGGAGGTGG TTACTGTTCC CTTTATGGAT CAATTGGTTG AAGATGTACC TGCGCCTGAG
CTTTGGGAGC AACCTTGGTT CTGGCGTGCG GTGAAGTTAG GCGTTGGCGC TTTGGTTATC
TTAGTGCTGA TCCTTGCTGT AGTACGTCCA ATGCTGAAAC GCTTAATCTA CCCAGATAAT
GTGAACATGC CAGAGGATTC AAGACTCGGT AATGAGTTGG CGGAGATTGA AGATCAATAC
GCCGCCGATA CCTTAGGGAT GCTCAATACC AAAGAAGCAG AGTATAGTTA TGCCGACGAT
GGCTCAATTC TTATCCCTAA TCTGCATAAA GATGATGATA TGATTAAAGC TATCCGTGCG
CTTGTGGCCA ATGAGCCCGA GCTTTCTACC CAAGTCGTGA AAAACTGGTT ACAAGACAAT
GGCTGA
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| Protein sequence | MIVGSNAGAV DQGVQQENKS GVLGSLGGVD MMRQITMILA LAICLALAVF VMIWAQEPEY
RPLGKMETQE MVQVLDVLDK NKIKYQIDVD VVKVPEDKYQ EVKMMLSRAG IDSAAASSKD
FLTQDSGFGV SQRMEQARLK HSQEENLARA IEQLQSVSRA KVILALPKEN VFARNTAQPS
ATVVINTRRG GLGQGEVDAI VDIVASAVQG LEPSRVTVTD SNGRLLNSGS QDGVSARARR
ELELVQQKEA EYRTKIDSIL SPILGPDNFT SQVDVSMDFT AVEQTAKRFN PDLPSLRSEM
TVENNSTGGS TGGIPGALSN QPPMESNIPQ EADKATESVT AGNSHREATR NFELDTTISH
TRQQIGVVRR VSVSVAVDFK PGAAGENGQV ARVARTEQEL TNIRRLLEGA VGFSAQRGDV
LEVVTVPFMD QLVEDVPAPE LWEQPWFWRA VKLGVGALVI LVLILAVVRP MLKRLIYPDN
VNMPEDSRLG NELAEIEDQY AADTLGMLNT KEAEYSYADD GSILIPNLHK DDDMIKAIRA
LVANEPELST QVVKNWLQDN G
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