Gene Shewmr7_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1348 
Symbol 
ID4255420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1564367 
End bp1564705 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content46% 
IMG OID638121982 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_737404 
Protein GI114046854 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.612995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATTG GCGCGAATTC ATTACTGCAA GAAATGCAGT CACTTCAAGG TGAAATCAAA 
CCTTCTTTTG GGATTTCACC CAATAACATT GTGCAGCAAG TGAATAACAC CAGCGGTGCT
GACTTTGGAC AACTCCTCTC CCAAGCCATT GGCAATGTCA GTGGTTTGCA GTCAACCTCA
TCGAATCTCG CGACTAGGCT TGAAATGGGT GACACGACAG TGAGCCTTTC TGATACTGTT
ATCGCCCGCG AAAAGGCCAG TGTCGCCTTT GAAGCCACTG TTCAAGTGCG CAATAAGCTC
GTTGAAGCTT ATAAAGAAAT AATGAGCATG CCTGTTTAG
 
Protein sequence
MQIGANSLLQ EMQSLQGEIK PSFGISPNNI VQQVNNTSGA DFGQLLSQAI GNVSGLQSTS 
SNLATRLEMG DTTVSLSDTV IAREKASVAF EATVQVRNKL VEAYKEIMSM PV