| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1345 |
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| Symbol | |
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| ID | 4255417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1560232 |
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| End bp | 1561665 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638121979 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_737401 |
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| Protein GI | 114046851 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAAA CAGATCAACG AATTTTACTT GTCGGAACCC CATCAGAGCG CTTAAGTCGC
CTGTGTTGCA TTTTTGAATT TTTAGGTGAG CAGATTGAAA TCATCTCCAC CGAAAAGTTG
AGCTCTTGTC TCCAAGATAC CCGTTATCGT GCCTTAGTGC TGACAACTGA CAATATGTCT
GTTGAGGCAT TGAAATCACT CGCTAATCAG TACCCGTGGC AACCTATTTT ATTGTTTGGC
AACGTCGGTG ATCTGCAAGT ATCGAATGTG CTTGGTCAAA TCGAAGAGCC ATTAAACTAT
CCGCAACTCA CTGAACTGCT GCATTTTTGC CAAGTGTATG GCCAGGTTAA ACGTCCTCAA
GTGCCAACCA GTGCGAATCA AACCAAACTA TTCCGTAGTT TAGTGGGGCG CAGTGAAGGT
ATTGCCAATG TCCGTCATTT GATTAGCCAG GTTGCAACTT CTGATGCGAC AGTATTAGTG
CTAGGACAGT CGGGTACAGG TAAGGAAGTC GTCGCTCGTA ACATTCATTA CTTGTCTGAA
CGCCGTGATG GTCCTTTTAT TCCGGTTAAC TGTGGTGCGA TTCCGCCAGA ACTACTTGAA
AGCGAATTAT TCGGTCATGA GAAGGGCTCT TTTACGGGGG CCATTAGTTC GCGTAAGGGC
CGCTTTGAGC TCGCAGAAGG TGGCACACTG TTTCTCGATG AAATCGGCGA TATGCCTTTG
CAGATGCAGG TAAAATTGCT GCGTGTGTTG CAGGAGCGCG TATTCGAGCG TGTCGGTGGC
ACTAAGACGA TCAATGCCGA TGTGCGTGTT GTCGCTGCGA CCCACAGAGA TCTCGAAAGC
ATGATCACCG GCAACGAGTT CCGTGAAGAT CTTTACTATC GCCTCAACGT TTTTCCGATT
GAGATGCCTG CGCTAAGCGA CCGAAAGGAT GACGTTCCTT TACTGTTGCA AGAGCTGGTA
AGCCGAGTCT ATAACGAAGG ACGTGGCAAA GTTCGCTTTA CCCAACGTGC GATTGAATCG
TTAAAAGAGC ACGCTTGGTC GGGTAACGTG CGTGAATTGT CTAACTTGGT TGAGCGTTTA
ACGATTTTAT ATCCTGGCGG TTTAGTCGAT GTGAATGACT TGCCTATCAA GTATCGCCAT
ATTGATGTGC CCGAATACAG CATCGAACTC AGTGAGGAGC AACAGGAGCG TGATGCGCTA
GCATCCATCT TCACTAGTGA AGAGCCTGTA GAAATCCCTG AAACCCGTTT CCCGAGTGAA
TTACCGCCGG AAGGGGTCAA CCTTAAGGAT CTGCTGGCTG AGCTTGAAAT CGACATGATT
CGTCAAGCGT TAGAGCAGCA GGATAACGTC GTTGCGCGTG CGGCAGAAAT GCTCGGTATT
CGCCGTACTA CTTTGGTTGA AAAAATGCGT AAGTACGGAA TGACGAAAGA ATAG
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| Protein sequence | MMQTDQRILL VGTPSERLSR LCCIFEFLGE QIEIISTEKL SSCLQDTRYR ALVLTTDNMS
VEALKSLANQ YPWQPILLFG NVGDLQVSNV LGQIEEPLNY PQLTELLHFC QVYGQVKRPQ
VPTSANQTKL FRSLVGRSEG IANVRHLISQ VATSDATVLV LGQSGTGKEV VARNIHYLSE
RRDGPFIPVN CGAIPPELLE SELFGHEKGS FTGAISSRKG RFELAEGGTL FLDEIGDMPL
QMQVKLLRVL QERVFERVGG TKTINADVRV VAATHRDLES MITGNEFRED LYYRLNVFPI
EMPALSDRKD DVPLLLQELV SRVYNEGRGK VRFTQRAIES LKEHAWSGNV RELSNLVERL
TILYPGGLVD VNDLPIKYRH IDVPEYSIEL SEEQQERDAL ASIFTSEEPV EIPETRFPSE
LPPEGVNLKD LLAELEIDMI RQALEQQDNV VARAAEMLGI RRTTLVEKMR KYGMTKE
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