Gene Shewmr7_1339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1339 
SymbolflgL 
ID4255411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1552809 
End bp1554017 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content43% 
IMG OID638121973 
Productflagellar hook-associated protein FlgL 
Protein accessionYP_737395 
Protein GI114046845 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTAT CAAGTGCGCA GCTCTTTAAT CAAAGCATTA GTAGTGTGCT GCAAAAACAA 
ACGGCCACGA GCAAGATTCT GGATCAGCTT AGCAGCGGCA AAAAGGTCAA TACCTCAGGG
GATGACCCGG TTGCGGCTTT AGGTATCGAT AACCTGAATC AACGCAATGC CTTAGTCGAT
CAATTTATGA AGAATATCGA CTATGCCACC AATCATCTTC AACAAACTGA AAGTCAGTTA
GGCCAAGCCG ATGCCTTAAT ATCCAGTATG AAAGATTTGA TGCTACAGGG TTCAAACGGC
AGCCAAACAT CTGAGGAGCG GCAAACTATT GCCGATGATT TGCGCAAGAG CCTTGACCAG
TTATTGACAA TTGCCAATAC CAAAGATGAA TCGGGCAACT ATTTGTTTGC GGGTAACAAG
ACTGAGACTT TGCCATTCCA ATTTGATGCT AATGGCAAAA TTGTCTATCA AGGTGATTCT
GGTGTTCACA GTGCCATAAT CGCATCAGGT ATACAGCTTA ATACCAATGT TGCCGGTGAT
ACCGCATTCA TCAAATCCCC CAATGCAATG GGCGATTATA GCGTCAATTA TTCGTCATCC
CAGCAAGGAG AGTTCAGTGT TACCAGTGCA AAGCTTGACG GTGTAACCCC TTCACTTTCC
GACTATCAGA TTAATTTTTT AGATGATGGT GCGGGTGGTA TTAATGTGGA AGTCACTGAT
ACTGCTACCC CTGCGAATGT GATTTCAGCC GCAGCCCCTT TTGACCCCTC AGCATCAATC
AATTTTGACG GCGTTAAGCT AAGCATTGAA GGTGAGCCAA AAATTGGTGA CAGCTTCACC
CTTCACCAAG AAGCTGAAGT GAGTATTTTC GATACCTTTA GTAAGGCGAT TGCTCTTTTT
GACAATGCCG ACCAAGTACA GACGCCCTCT GGTCAATCAG AATTGGCACA GTTATTGAAT
AATATCCAGA GTGGTGTCAA ACAAATCAGT CAGCAACAAG GCTTAGCAGG CAACAGTTTA
AAAGTACTGG AAAAATATAC TGATAAGCAT ACTGATGAAA AGTTGATCAA CACCTCGGCG
TTATCCAAGT TGGAGGATGT CGACTATGCC ACTGCGATTA CTGAATTTGA AAAGCAACAA
CTTGCGCTCA ATGCGGTATC CAGTGTGTTT AGTAAAGTGG GCTCAGTATC GTTGTTTGAC
TATATCTAG
 
Protein sequence
MRLSSAQLFN QSISSVLQKQ TATSKILDQL SSGKKVNTSG DDPVAALGID NLNQRNALVD 
QFMKNIDYAT NHLQQTESQL GQADALISSM KDLMLQGSNG SQTSEERQTI ADDLRKSLDQ
LLTIANTKDE SGNYLFAGNK TETLPFQFDA NGKIVYQGDS GVHSAIIASG IQLNTNVAGD
TAFIKSPNAM GDYSVNYSSS QQGEFSVTSA KLDGVTPSLS DYQINFLDDG AGGINVEVTD
TATPANVISA AAPFDPSASI NFDGVKLSIE GEPKIGDSFT LHQEAEVSIF DTFSKAIALF
DNADQVQTPS GQSELAQLLN NIQSGVKQIS QQQGLAGNSL KVLEKYTDKH TDEKLINTSA
LSKLEDVDYA TAITEFEKQQ LALNAVSSVF SKVGSVSLFD YI