Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1338 |
Symbol | |
ID | 4255410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1550872 |
End bp | 1552797 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121972 |
Product | flagellar hook-associated protein FlgK |
Protein accession | YP_737394 |
Protein GI | 114046844 |
COG category | [N] Cell motility |
COG ID | [COG1256] Flagellar hook-associated protein |
TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATCG ATCTATTAAA TATTGCCCGT ACAGGCGTAC TCGCATCCCA GTCACAACTG GGAGTGACCA GTAATAACAT CGCCAATGCC AACACCGCGG GTTATCACAG ACAAGTGGCG ACGCAAACCA CGTTAGATTC ACAACGTCTT GGTAATAGCT TCTATGGCAC AGGTACTTAT GTCTCTGATG TTAAGCGTAT TTACAATGAC TATGCTGCAC GCGAATTGCG GATTGGCCAA ACCACGCTGA GTGCGGCCGA AGCGAGCTAC GGCAAGTTGA GCGAGCTTGA TCAAGTCTTC TCGCAAATCG GCAAAATAGT GCCACAGAGC TTGAACGATT TGTTTTCAGG GCTAAATAGT TTGGCGGACT TGCCTGCAGA CCTAGGCATT CGCAGCTCGA CCTTAAACGA TGCCAAACAA TTGGCGAACA GTTTGAACCA GATGCAGTCG ACGCTGAACG GACAGCTGAC TCAAACCAAT GATCAAATCA CGGGTATGAC GAAGCGCATC AATGAGATCA GCACTGAACT TGCCAATCTC AACCTCGAGT TGATGAAGTC GCCCAACCAA GACGCTATGT TACTGGATAA GCAAGATGCA TTGGTACAGG AGCTGAGTCA GTACGCGCAG GTGAATGTGA TCCCCTTAGA AAACGGGGCT AAAAGCATCA TGCTCGGCGG CGCAATTATG CTGGTTTCGG GTGAAGTCCC CATGTCGGTC AGCACTGCGA CGGGCGACCC TTTCCCGAAT GAACTGCAGT TGATGTCGAG CATTGGCTCT CAAAGTGTAC GTGTCGACCC TAACAAGTTA GGTGGTCAGC TCGGTGCCTT GTTTGAGTAT CGTGAACAAA CTCTAGTGCC AGCAGGGTTG GAACTCGATC AACTGGCGCT TGGGGTTGCT GATAACTTTA ACAAGTTACA GGCACAAGGA TTCGATCTTA ATGGCCAAGT GGGGACCGAT ATCTTTAAGG ATATCAACGA TCCTCTAATG TCTATCGGTC GTGTGGCTGG ATTTTCCGGC AACACAGGTA ATGCGACCTT AGGTGTCAAT ATTGACGATA CGAGCGCTTT ATCGGGTGGC TCCTACGAGC TGTCTTTTAC GGCGCCAGCC ACCTATGAAC TCAGAGACAC GCAAACCGGA ACTATCACAC CGCTCACCTT AAACGGCACT AAGCTCGAAG GCGGCGCGGG ATTTTCGATT GATATTAAAG CCGGCGCCAT GGCTTCTGGG GATCGATTCG CGATTCGTCC CACCGCGGGA GCGGCGAATG GTATTGAAGT GGTGATGACA GATCCCAAAG GCATTGCCGC CGCTGCGCCC AAAATCACTC CAGATGCAGC GAACTCAGGC AATACTCAAG TGAAGGTAAC GCAAATTACC AACCGCAGTG CGGCAAACTT CCCGACAACG GGGAGCGAAC TCACCATTCA ATTGGATACC ACTGCCGTGC CGCCAACCTT TGAAGCCTTC GATGTCAATG GCGCATCCCT TGGCGCACCA GTGGCATATA CGCCACCCAG CATTAGTGCG TTTGGCTTTA CCTTTGAAGT CGATAGCAGT GCGGCGGCCG CAGGCGACAA ATTTACCTTC GATTTATCCT TTGCCGAAGG GGATAACACT AACGCCTTGG CAATGGCCAA ACTCAGTGAA ACCAAAGTGA TGAATGGCGG CAAATCGACG CTTGCCGATG TGTTTGAACA GACCAAGCAA GATATCGGCA GTCAAACCAA AGCGGCCGAA GTTCGAGTTG GGGCGGCTGA TGCGATATAT CAACAGGCTT ACGCCAGAGT AGAGAGCGAA TCAGGGGTGA ACTTAGATGA AGAAGCGGCA AACCTGATGC GTTTCCAACA GGCTTACCAA GCGTCTGCGC GGATCATGTC AACCGCCCAG CAAATTTTTG ACACCCTACT GACCTCAGTG CGTTAG
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Protein sequence | MAIDLLNIAR TGVLASQSQL GVTSNNIANA NTAGYHRQVA TQTTLDSQRL GNSFYGTGTY VSDVKRIYND YAARELRIGQ TTLSAAEASY GKLSELDQVF SQIGKIVPQS LNDLFSGLNS LADLPADLGI RSSTLNDAKQ LANSLNQMQS TLNGQLTQTN DQITGMTKRI NEISTELANL NLELMKSPNQ DAMLLDKQDA LVQELSQYAQ VNVIPLENGA KSIMLGGAIM LVSGEVPMSV STATGDPFPN ELQLMSSIGS QSVRVDPNKL GGQLGALFEY REQTLVPAGL ELDQLALGVA DNFNKLQAQG FDLNGQVGTD IFKDINDPLM SIGRVAGFSG NTGNATLGVN IDDTSALSGG SYELSFTAPA TYELRDTQTG TITPLTLNGT KLEGGAGFSI DIKAGAMASG DRFAIRPTAG AANGIEVVMT DPKGIAAAAP KITPDAANSG NTQVKVTQIT NRSAANFPTT GSELTIQLDT TAVPPTFEAF DVNGASLGAP VAYTPPSISA FGFTFEVDSS AAAAGDKFTF DLSFAEGDNT NALAMAKLSE TKVMNGGKST LADVFEQTKQ DIGSQTKAAE VRVGAADAIY QQAYARVESE SGVNLDEEAA NLMRFQQAYQ ASARIMSTAQ QIFDTLLTSV R
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