Gene Shewmr7_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1328 
Symbol 
ID4258603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1542125 
End bp1542964 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content46% 
IMG OID638121962 
ProductMCP methyltransferase, CheR-type 
Protein accessionYP_737384 
Protein GI114046834 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGTGC CTGACAAATC ACTCGCTGAA GCCGAATATA ATCAATTTAG GTTGTTCCTA 
GAACAACACA GCGGCATCGT ACTAGGGGAA AATAAACAAT ACCTAGTGCG CAGTCGCCTT
GCTCCTTTGA TGGGCAAATA TAATCTGCCT TCGTTATCCG ATGTAGTAAA ACATTCGATG
AAGCCAACGG AGCGAGCCTT ACGGGCTGAA GTGATCGACG CCATGACAAC CAATGAAACC
TTATGGTTTC GTGACCGTTA TCCCTTTGAG TTGCTGAATA ATGTTTTGTT ACCTGAATAC
AGTAAGTTGG GGCGTCCATT AAAGATATGG TCTGCGGCTT GCTCGTCCGG CCAAGAGCCT
TATTCGTTGG CAATGACCAT ATTAGAATAT CAGCAGAAGA AACCGGGAGC TTTACCTGGG
GGAGCCGCAA TTCAGGCGAC CGATCTCTCG CCTTCTATGT TGGAGCGTTG CAAAAATGCC
GAGTACGACA GTTTAGCATT GGCACGCGGA TTATCTGAGG AACGTAAGCG CCAGTTTTTT
GATGCTTTGC CCTCTGGCAA CATGCGTGTA AAAGATAATG TTAAGCGTTT AGTCAATTTT
CGCGCCCATA ACTTACTTGA GAGTTACACC TTACTCGGCA AGTTCGACAT CATTTTCTGC
CGAAATGTAC TGATTTATTT TGCCCCGGAG GCAAAAGCAA AAATTTTGCG GCAATTCGCT
GCCGCTTTGA ACCCGAAGGG CATACTCTTC CTCGGTGCGT CAGAATCGAT AGCGGGTCTG
ACCGATGAGT TTGATATGGT ACGTTGCAAC CCTGGCATCT ATTACCAGAA AAAGACTTAA
 
Protein sequence
MNVPDKSLAE AEYNQFRLFL EQHSGIVLGE NKQYLVRSRL APLMGKYNLP SLSDVVKHSM 
KPTERALRAE VIDAMTTNET LWFRDRYPFE LLNNVLLPEY SKLGRPLKIW SAACSSGQEP
YSLAMTILEY QQKKPGALPG GAAIQATDLS PSMLERCKNA EYDSLALARG LSEERKRQFF
DALPSGNMRV KDNVKRLVNF RAHNLLESYT LLGKFDIIFC RNVLIYFAPE AKAKILRQFA
AALNPKGILF LGASESIAGL TDEFDMVRCN PGIYYQKKT