| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1316 |
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| Symbol | |
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| ID | 4258065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1532286 |
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| End bp | 1533407 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638121949 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_737372 |
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| Protein GI | 114046822 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0457326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGAG CAGCCCGATG TTCTTGGCGT GCATTTTACC TTTGCGTGAT TGCCGTCTCC
ACCTTAACGG CCTGTCAAAA GGAAGTGACA GAGCATGCCA ACGCCACGCA ATTGCAAACC
GTAACAACGG CGCCACTGCG CTTGTCGACT AGCTATCAGA GTGAGCAAGT ATTCACTGGC
ACGATCCGCG CCGGCAATAC CACGGGTGTC GGCTTCGAAC TATCGGGTAA GCTCAGTGAG
TTAACTGTCG ATAGCGGCGC TAAGGTGACG CAAGGGCAAG TATTGGCCAA GCTCGATACC
CGCTTGCTCG ATGCCGAACA TCAGGAGATC CAAGCCAGTC TGGCGCAAAC CCAAGCTGAT
GTCGACCTTG CCACCAGCAC CCTCAACCGG AATCTTGAGC TTAAAAAATC CGGTTATGTT
TCAGAACAGT TGCTCGATGA GAATCGCACA CAACTGGCAA GCCTAGAAGC TGGCAAAAAG
CGATTATTGG CCTCTCTACA GGCAAACCAG CTTAAACGCG ACAAATCACA GCTACTCGCG
CCCTTCAATG GCATCATCAG CCAGCGGCAA CACAACCTAG GGGAAGTGGT CGAAGCAGGT
AGTCCAGTGT TCATTTTAGT TGGCAGTGTG AATACCGAAG CCTATATCGG TGTCCCAGTC
GCGGTCGCAC AGCAATTCGT CAATGGGCAG AATGTGACAG TGAGCGTCCA TAATCAGCAA
TTTACCGCCA AGATTGCCGG GATCAGTGCC GAGGTTAACC CCATTAGTCG CACCCTGCAG
CTGCGGATCA GCCTGCCGGA ACATGCCAAT GTGATCAACG GTGAAATCGC CTATTTGCAT
CAACAACAAA CCGTCGAGCA AGCGGGCTAT TGGGTGCCAG TATCGGCACT TATCGATGGG
ATCCGTGGCC GCTGGAATAT CTATGTAACT ACGCCGCCTT CACATTCAAC TTCCGATAGC
ACTTCAACTC AGATAGAGCG TCGCGATGTC GATATCCTCT ACACCACTCA AGATATGGCC
TATATCCAAG GCGCCATTAA GGCCGATGAA CAATATGTGA CTCAAGGCTT GCATAAGTTA
GTGGTGGGCC AGGCCGTTTC TTCGATTGCA ACAACGAGGT AA
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| Protein sequence | MDRAARCSWR AFYLCVIAVS TLTACQKEVT EHANATQLQT VTTAPLRLST SYQSEQVFTG
TIRAGNTTGV GFELSGKLSE LTVDSGAKVT QGQVLAKLDT RLLDAEHQEI QASLAQTQAD
VDLATSTLNR NLELKKSGYV SEQLLDENRT QLASLEAGKK RLLASLQANQ LKRDKSQLLA
PFNGIISQRQ HNLGEVVEAG SPVFILVGSV NTEAYIGVPV AVAQQFVNGQ NVTVSVHNQQ
FTAKIAGISA EVNPISRTLQ LRISLPEHAN VINGEIAYLH QQQTVEQAGY WVPVSALIDG
IRGRWNIYVT TPPSHSTSDS TSTQIERRDV DILYTTQDMA YIQGAIKADE QYVTQGLHKL
VVGQAVSSIA TTR
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