| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1315 |
|---|
| Symbol | |
|---|
| ID | 4258064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 1529203 |
|---|
| End bp | 1532283 |
|---|
| Gene Length | 3081 bp |
|---|
| Protein Length | 1026 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638121948 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_737371 |
|---|
| Protein GI | 114046821 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0188093 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAG CCTTCGTTGA AAATGGCCGC TTAGTCAGCC TAGTGATCGC CCTACTGCTA
GTCGCTGGAT TTGGTGCGAT ATCCAGTTTG CCACGCACTG AAGATCCGCA CATCACTAAC
CGATTTGCGT CGGTAATCAC CCCTTATCCC GGCGCCTCCG CCGAGCGAGT CGAGGCACTT
GTCACCGAAG TATTAGAGAA TCAGTTGCGT CGCCTCGAGG AAATCAAGCT CATTCAATCC
ACCTCAAGAC CCGGCATATC GGTGATCCAA TTAGAGCTAA AAGATACCGT CAAGGATACA
GATCCCGTCT GGTCTAGGGC GCGGGATCTA TTAGCCGATA CCAGAAACAC CCTCCCCGAT
GGCATACAGA CACCGACCTT AGATGATCAA GTCGGCTACG CCTACACAGC TATTTTAAGC
CTAGTGTGGA ACAATAGCAG TCAACCTCGG GTGGATATGC TCAACCGCTA CGCCAAGGAA
TTACAAAGCA GGCTGAGACT CTTATCCGGC ACCGACTTCG TCAAACTCTA CGGCGCGCCC
GAGGAAGAAA TCCTGGTGCA GCTCGATGGC TATAAGATGA GCCAGTTGCA ATTAACGCCG
GGAACCATAG CGAAAATCTT AAGCAGCGCC GACAGTAAAA TTGCCGCGGG TGAGATCAAT
AACAACAATT TTCGCGCCTT TGTTGAAGTC TCTGGTGAAC TCGACTCCCA GAGCCGCATT
CGCCAAGTAC CATTGAAAGT CGATACTCAG GGACAAATTA TTCGTTTGGG CGATATCGCC
CATATCAGCC GCCAACCTAA AACCCCCGCT GACAGCATCG CCCTTGTTGA TGGCGAGCAG
GGCGTGTTTG TCGCGGCGCG TATGCTCAAC AATACCCGCG TCGATATCTG GCAGGGTCAA
GTCAAACAGC TGGTCGATGA ATTCAATCAA GAACTGCCTG CTAACATCAA AGTACAATGG
TTATTTGAGC AGAACAGCTA TACCAGTGAC CGCCTCGGCG GATTAATCAT CAACCTACTA
CAAGGATTTG TGATTATTCT GGCGGTCTTG CTGCTTACCT TGGGCTTAAG AAACGCGATT
ATCGTCGCCC TGTCACTCCC CTTGACCGCC CTCTTCACCT TGGCCTGTAT GAAATATATC
GGCCTACCCA TTCATCAAAT GTCGGTGACG GGTCTAGTCG TTGCACTTGG GATCATGGTG
GACAATGCCA TTGTGATCGT CGATGCCATC GCCCAGCGTC GCCAACAAGG AATGAACCGC
TTACGCGCGG TAAGTGAGAC CTTACATCAC CTCTGGCTAC CCTTGGCGGG CTCAACCATC
ACCACCATTT TAGCCTTTGC TCCTATCGTG TTGATGCCGG GCGCTGCGGG GGAGTTTGTC
GGGGGTATCG CCATGTCGGT GATGTTTGCC CTGCTGGGTT CCTATGTAAT TTCCCATACC
TTGATTGCTG GACTTGCGGG ACGCTTTAGC ATTGAAGGTA AAAATCCTGC CTGGTATCAA
CATGGGATTA ACGTTCCTTT AGTGAGTGGT TACTTTCAAG CAAGCTTAAG ATTTGCGCTT
AATCGTCCAC TGCTTAGCGC GACACTGATT GGAGTTATTC CCCTGTTAGG TTTTTATGCT
TCAGGCAAGA TGACAGAGCA ATTCTTCCCG CCATCGGATC GGGATATGTT TCAAATTGAG
CTGTATCTCG CACCCCATGT CAGCCTCGAA AACACCTTAA ATCAAGTGCA ATTGATGGAT
AAGCAATTGC ACCAAATCGA GGGCATCACC CAAGTCGATT GGGTTGTGGG GGGCAATACG
CCTTCCTTTT ATTACAACTT AACCCAGCGT CAGCAAGGCG CCACCAACTA TGCACAGGCC
ATGGTGAAAG CCAGTGACTT TGAGCGCGCC AACACTCTTA TCCCTGAGTT GCAGCAAACC
TTAGATAAGG CCTTTCCAGA GGCGCAGGTG CTAGTGCGTA AACTCGAACA AGGGCCGCCC
TTTAATGCGC CGGTCGAGTT AATGATATTT GGCCCTAACC TTGAAACCTT ACGCTCACTT
GGGGATGAGG TGCGCAATAT CTTAGCCGCC ACGCCCGATG TGCTGCATAC TCGAGCGACG
TTGAGCGCTG GCGCACCAAA GGTGTGGTTG CAAGTCAATG AAGATGCGAG TTTGATCAGT
GGGTTAACCC TGACGGATAT CGCTAGACAG GTTCAAATGG CCACCACGGG CGTTATCGGT
GGCAGTGTAC TAGAACAAAG CGAGTCACTG CCGATTCGTG TACGTTTGGG CGATACCAGT
CGCGAGCAGG CTAGCCGCCT CTCGGAAATT CAGCTTGTGA CCCCCTCAGG CACAGCCGTG
CCCTTATCTG CGCTGTCCCA CAATGAGGTA CAAGTCAGCC GCGGGGCTAT CCCTAGGCGT
AATGGCCAAC GTGTCAACAC GATTGAAGCC TATATCGTCA GCGGTGTATT GCCCGCTCAA
GTATTAAACG ATGTGAAAGA TAAAGTCGCC GGGATTTCGC TCCCAGCGGG TTATCGAATT
GAAATCGGCG GCGAAAGCGC TAAACGCAAT GAGGCAGTCG GCAATCTTCT CTCCAATCTG
ATTTTGGTCG TTACCCTGCT GCTGGCCACG GTCGTCCTGT CCTTTAACTC CTTTAGGCTC
ACGGCGATTA TTTTACTGAG CGCATTACAG TCGGCGGGGC TTGGGTTACT TGCAGTCTAT
GTGTTTGGTT ATCCCTTTGG CTTTCCAGTC ATCATTGCCC TACTCGGCCT AATGGGGCTT
GCGATCAACG CTGCGATTGT GATTTTGGCC GAACTGGAAG ATACCGACAA TGCCCGAGCA
GGTGATAAAG AGGTGATTAT CACGACTGTC AGCGGTTGCG GTCGGCATAT CACTTCGACC
ACTATCACCA CGGTCGGCGG GTTTATTCCG CTTATTATTG CGGGCGGTGG TTTCTGGCCT
CCCTTTGCCA TCGCGATTGC CGGCGGGACC TTACTGACGA CGCTGCTCTC ACTCGTTTGG
GTACCGACCA TGTATCTGCT GCTGATGAAA ACGCGCCGTA CGGCTCCGAC ACCGGCGTTA
TCGTCTCAAA TCGCGTCATG A
|
|---|
| Protein sequence | MIKAFVENGR LVSLVIALLL VAGFGAISSL PRTEDPHITN RFASVITPYP GASAERVEAL
VTEVLENQLR RLEEIKLIQS TSRPGISVIQ LELKDTVKDT DPVWSRARDL LADTRNTLPD
GIQTPTLDDQ VGYAYTAILS LVWNNSSQPR VDMLNRYAKE LQSRLRLLSG TDFVKLYGAP
EEEILVQLDG YKMSQLQLTP GTIAKILSSA DSKIAAGEIN NNNFRAFVEV SGELDSQSRI
RQVPLKVDTQ GQIIRLGDIA HISRQPKTPA DSIALVDGEQ GVFVAARMLN NTRVDIWQGQ
VKQLVDEFNQ ELPANIKVQW LFEQNSYTSD RLGGLIINLL QGFVIILAVL LLTLGLRNAI
IVALSLPLTA LFTLACMKYI GLPIHQMSVT GLVVALGIMV DNAIVIVDAI AQRRQQGMNR
LRAVSETLHH LWLPLAGSTI TTILAFAPIV LMPGAAGEFV GGIAMSVMFA LLGSYVISHT
LIAGLAGRFS IEGKNPAWYQ HGINVPLVSG YFQASLRFAL NRPLLSATLI GVIPLLGFYA
SGKMTEQFFP PSDRDMFQIE LYLAPHVSLE NTLNQVQLMD KQLHQIEGIT QVDWVVGGNT
PSFYYNLTQR QQGATNYAQA MVKASDFERA NTLIPELQQT LDKAFPEAQV LVRKLEQGPP
FNAPVELMIF GPNLETLRSL GDEVRNILAA TPDVLHTRAT LSAGAPKVWL QVNEDASLIS
GLTLTDIARQ VQMATTGVIG GSVLEQSESL PIRVRLGDTS REQASRLSEI QLVTPSGTAV
PLSALSHNEV QVSRGAIPRR NGQRVNTIEA YIVSGVLPAQ VLNDVKDKVA GISLPAGYRI
EIGGESAKRN EAVGNLLSNL ILVVTLLLAT VVLSFNSFRL TAIILLSALQ SAGLGLLAVY
VFGYPFGFPV IIALLGLMGL AINAAIVILA ELEDTDNARA GDKEVIITTV SGCGRHITST
TITTVGGFIP LIIAGGGFWP PFAIAIAGGT LLTTLLSLVW VPTMYLLLMK TRRTAPTPAL
SSQIAS
|
|---|
| |