| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1311 |
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| Symbol | |
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| ID | 4258060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1524920 |
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| End bp | 1526059 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638121944 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_737367 |
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| Protein GI | 114046817 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00729464 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGATT ATGAAATATT GAGAGTTATC TGGTGGGCTC TGATCGGCGT ACTGTTCATC
GGATTTGCGG TCACTGACGG TTTTGACATG GGCGTGGGTG CACTTTTACC GATTATCGGT
AAAGACGATA CTGAGCGCCG TATTATGGTC AACACCATTG CTCCCCATTG GGACGGTAAC
CAAGTGTGGT TAATCACCGC AGGTGGTGCC TTGTTTGCAG CATGGCCAAT GGTGTATGCA
GTGTCTTTCT CTGGCTTCTA TGTGGCCATG ATGTTAGTGC TGTTTGCCTT GTACACTCGT
CCAGTGGGAT TTGACTATCG CTCTAAGATT GAAAATCCAA AATGGCGTAA GTCGTGGGAC
TGGGCATTGT TCTGTGGTGG CTTTATTCCA CCGCTGATCA TCGGTGTGGC CTTCGGTAAC
TTACTCCAAG GTGTACCATT CAATTTCGAT GAGTTCCTGC GTGCGACTTA TCACGGTGGT
TTATTTGGCC TGTTGAACCC ATTCGGTTTA CTGGCGGGCT TAGTGAGCGT GAGCATGTTT
ATGATGCAAG GCGCTGCTTG GTTACAAATG AAGACCGACG GTGAGCTGCG TGTACGTGCC
GCGAATGCGA CTCAGCTATG TGCACTGTTA GTGGCAGTAT TATTTGCCGC TGCGGGTGTG
TGGTTAGCCA ATGGTATTGA TGGTTATGTT ATCACTTCAA CCCTTGACCA CCATGCACTG
TCTAACCCAA CGCTGAAAAC CGTTGCGGTT GAATCTGGCG CTTGGTTAGC CAACTACGAT
AAGTATCCTA TTACTATGCT GTTCCCAGTA TTAGGTGTGG CATTACCACT GCTGGTTATC
CTAGTGAGCC GCTTAAATCG TTCAGGTTTT GCGTTCTTAT TTAGCTCGCT GACAGTGGCT
ATGGTGATCT TAACTTGTGG TGCAGCAATG TTCCCATTCG TTATGCCATC TTCATTAGAT
CCTAACGTGA GCTTAACCAT GTGGGATGCG ACTGCGAGTG AAATGACATT AACTGTGATG
ACTTGGGCGG CGATTATCTT CGTTCCAATC GTGTTAAGTT ACACTGTATG GACTTACTTC
AAGATGTTTG GCCGCTTAAA CCGCAAACAT ATTGAAGATA ACAAAGCCTC ACTCTATTAG
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| Protein sequence | MFDYEILRVI WWALIGVLFI GFAVTDGFDM GVGALLPIIG KDDTERRIMV NTIAPHWDGN
QVWLITAGGA LFAAWPMVYA VSFSGFYVAM MLVLFALYTR PVGFDYRSKI ENPKWRKSWD
WALFCGGFIP PLIIGVAFGN LLQGVPFNFD EFLRATYHGG LFGLLNPFGL LAGLVSVSMF
MMQGAAWLQM KTDGELRVRA ANATQLCALL VAVLFAAAGV WLANGIDGYV ITSTLDHHAL
SNPTLKTVAV ESGAWLANYD KYPITMLFPV LGVALPLLVI LVSRLNRSGF AFLFSSLTVA
MVILTCGAAM FPFVMPSSLD PNVSLTMWDA TASEMTLTVM TWAAIIFVPI VLSYTVWTYF
KMFGRLNRKH IEDNKASLY
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