| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1308 |
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| Symbol | |
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| ID | 4258057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1516508 |
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| End bp | 1517944 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638121941 |
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| Product | putative transglycosylase |
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| Protein accession | YP_737364 |
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| Protein GI | 114046814 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0643025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGAT TTCTGTTCGC GATTATCTTA GGTTTCTTAC TGACGGCGTG TCAGCAAGTG
ACCGTGGAAG AAACAGAATA TGTCCCCCAT AAACTCACCG AATTAAGGGT CGGCACCCTT
TATGGCCCGC AAATTTATAT GACCTCGGGT CAAGGCAACA GCGGTTTCGA TTACGATATG
GCGGTGCTGT TTGCCGAGTA TCTCGATGTG CCCTTAAAAA TGGTGCCTTA TACCAACCGC
GCCGAACTCT ATGACGCATT GAAAAAAAAC GAGATTGATA TCATTGCCGC GGGGATGACT
GAAACCCCAG CGCGGCGCGA ACAATTCCGT TTAGGCCCGC CGCTGTATCG CGTCAATCAA
GTACTGGTTT ACCGTGAAGG CATGCCAACA CCCAAAGACA TCACAGATTT AAAAGGCAAA
ATTACCGTAA TTGCCGACTC TTCTTTTGTG GAAACCCTGA CACAATTACA GAAACGCCAT
CCGACGCTGG TGTGGGATCA AGTCACAGAT AAAGACAGCG AAGAGCTGCT GGCGATGATC
GCCAACAAGG AAATCGACTA CACCATCGCC GACTCGAGCA GCGTGCAGAT TAACCGCCGT
TATTTACCGG ATCTGCGTTC AGGGCTCGTG CTAGAAGAAA AGCTTGATGT GGTTTGGTTA
CTGCCCCCCA CACACAGTGA CAGCTTGATG AGTCAGTTAT TGGCGTTTTG GCACCAAGAA
AAACTCGCCG GCACACTCGA TCACTTAAAC GAAAAGTACT TTGGTCACGT TAAGCGTTTC
GACTATATCG ATACCCGCGC CTTCCTGCGC GCCATCGAAA CCGTATTGCC CCGTTATCGT
CAGCTTTTCG AAACCCACGC AGGTGACTTA GATTGGCGTA AATTGGCGGC GACCAGTTAT
CAAGAATCCC ATTGGAATCC TAATGCCCGC TCACCGACTG GGGTGCGCGG CATGATGATG
CTCACGCAGC CGACCGCCAA AGAAATTGGC ATTACGAACC GCCTCGATGC GAAAGAAAGT
ATTCGCGGCG GCGCCGCTTA TTTACGGGAT ATGATCAACC GTCTGCCCGA GTCTATCCCC
GAGAGTCAAC GCATGTGGTT TGCGCTGGCC TCTTACAATA TCGGTTATGC CCATGTGGAA
GATGCGCGTA AACTCGCCGA ATCTATGGAG CTTAATCCCA ACGCTTGGCG GGATCTTAAA
AAGGTATTGC CACTGCTGCA AAAGCGTAAA TATTACCAGA AGACCCGCTA CGGCTATGCC
CGTGGTAGCG AAGCCGTACA TTACGTCGAC AGCATTCGCC GCTATTACGA CACCTTAGTC
TGGGTCGATA ATCAATCTAA ACAACAAAAT AGCGATGAGG AAGAGCCGAG CGACCTCGCC
TCGGAAGATG GCCCAGCGCC AGTGCCCGGC ACCCTCAGCC CAGATAAGCC GAAATAG
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| Protein sequence | MTRFLFAIIL GFLLTACQQV TVEETEYVPH KLTELRVGTL YGPQIYMTSG QGNSGFDYDM
AVLFAEYLDV PLKMVPYTNR AELYDALKKN EIDIIAAGMT ETPARREQFR LGPPLYRVNQ
VLVYREGMPT PKDITDLKGK ITVIADSSFV ETLTQLQKRH PTLVWDQVTD KDSEELLAMI
ANKEIDYTIA DSSSVQINRR YLPDLRSGLV LEEKLDVVWL LPPTHSDSLM SQLLAFWHQE
KLAGTLDHLN EKYFGHVKRF DYIDTRAFLR AIETVLPRYR QLFETHAGDL DWRKLAATSY
QESHWNPNAR SPTGVRGMMM LTQPTAKEIG ITNRLDAKES IRGGAAYLRD MINRLPESIP
ESQRMWFALA SYNIGYAHVE DARKLAESME LNPNAWRDLK KVLPLLQKRK YYQKTRYGYA
RGSEAVHYVD SIRRYYDTLV WVDNQSKQQN SDEEEPSDLA SEDGPAPVPG TLSPDKPK
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