Gene Shewmr7_1305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1305 
Symbol 
ID4258054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1512132 
End bp1513598 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content50% 
IMG OID638121938 
Productinosine 5'-monophosphate dehydrogenase 
Protein accessionYP_737361 
Protein GI114046811 
COG category[F] Nucleotide transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0516] IMP dehydrogenase/GMP reductase
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID[TIGR01302] inosine-5'-monophosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACGTT TAATTAAAGA AGCGCTAACC TTTGACGATG TGTTACTTGT TCCTGCGCAT 
TCGACTGTAC TCCCAAACAC CGCCATTCTT AAGACTCGCC TGACTAACAC TATTGAACTG
AATATTCCGC TCGTGTCTGC TGCTATGGAC ACTGTGACCG AAGCGCGTCT TGCGATCGCC
ATGGCACAGG AAGGTGGCTT AGGTTTTATT CATAAAAACA TGAGTATAGA AAAGCAAGCT
GAAGAAGTTC GTAAAGTTAA AATTTACGAA GCGGGTGTGG TTCAACAACC TGTGACAGTG
ACGCCTTCAA CCACGCTGGC GGATCTTAAA GTACTGACTG CTAAGAATGG TTTTGCGGGT
TACCCTGTGG TGAACGAAGC CAATGAATTG GTGGGTATCA TCACTGGGCG TGACGTACGT
TTCGTGACTG ACTGGAGCAA AACTGTAGAA GAAGTGATGA CGCCAAAGGC GCGTTTAGTC
ACGGTTGCGG AAGGCACTAA GTTAGATGAA GTGCAAAAAT TAATGCACTC AAACCGAATC
GAAAAAGTGT TAGTTGTCGA CGATAACTTC AAGCTGAAGG GCTTAATCAC TGTAAAAGAC
TTCGAAAAAG CTGAGCGTAA ACCTAATGCT TGTAAAGACG AATTAGGTCG TTTACGTGTG
GGTGCTGCCG TAGGTGCCGG TGCGGGTAAC GAAGAGCGTG TCGATGCGCT GGTAAAAGCC
GGTGTTGACG TGCTGCTGAT CGATTCTTCC CACGGCCACT CTGAAGGCGT GTTACAACGT
ATCCGTGAAA CCCGCGCCAA ATACCCAGAT TTACAAATCA TCGGTGGTAA CGTGGCAACA
GCTGAAGGCG CATTAGCCCT AGTTGAAGCC GGCGTTAACG CGGTTAAAGT CGGTATCGGC
CCTGGTTCTA TTTGTACGAC TCGTATCGTG ACGGGTGTGG GCGTGCCACA AATTACCGCA
GTGTCTGACG CTGCCGCAGC TGTAAAAGGC TTAGGTATCC CAGTTATTGC CGACGGCGGT
GTCCGTTTCT CGGGTGACTT AGCCAAAGCC TTAGCCGCAG GTGCATCGTG CATCATGGCG
GGTTCAATGT TCGCGGGTAC CGATGAAGCG CCGGGCGAAA CAGAACTCTA CCAAGGCCGT
GCCTATAAGT CATACCGCGG TATGGGTTCT CTAGGTGCCA TGTCTCAAGG TTCTTCTGAC
CGTTATTTCC AATCAGACAA TGCTGCCGAC AAGCTGGTGC CAGAAGGCAT CGAAGGCCGT
GTCCCTTACA AAGGCAAGCT CAAGGAAATC ATCCATCAAC ATATGGGCGG TTTGCGTTCA
TGCATGGGCT TAACAGGCTG TGCCACGATC CAAGAACTGA ATGAAAAAGC GCAATTTGTG
AAAGTGACTT CTGCGGGCAT GGGCGAGTCC CACGTTCACG ATGTGACTAT CACTAAAGAA
GCGCCAAACT ACCGTTCAGG CTCTTAA
 
Protein sequence
MLRLIKEALT FDDVLLVPAH STVLPNTAIL KTRLTNTIEL NIPLVSAAMD TVTEARLAIA 
MAQEGGLGFI HKNMSIEKQA EEVRKVKIYE AGVVQQPVTV TPSTTLADLK VLTAKNGFAG
YPVVNEANEL VGIITGRDVR FVTDWSKTVE EVMTPKARLV TVAEGTKLDE VQKLMHSNRI
EKVLVVDDNF KLKGLITVKD FEKAERKPNA CKDELGRLRV GAAVGAGAGN EERVDALVKA
GVDVLLIDSS HGHSEGVLQR IRETRAKYPD LQIIGGNVAT AEGALALVEA GVNAVKVGIG
PGSICTTRIV TGVGVPQITA VSDAAAAVKG LGIPVIADGG VRFSGDLAKA LAAGASCIMA
GSMFAGTDEA PGETELYQGR AYKSYRGMGS LGAMSQGSSD RYFQSDNAAD KLVPEGIEGR
VPYKGKLKEI IHQHMGGLRS CMGLTGCATI QELNEKAQFV KVTSAGMGES HVHDVTITKE
APNYRSGS