Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1300 |
Symbol | hisS |
ID | 4258032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1505858 |
End bp | 1507135 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638121933 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_737356 |
Protein GI | 114046806 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAAAAC AGATCCAAGC GATTCGCGGA ATGAACGACA TTCTGCCAAC TCAAAGTCCT CTATGGCAAA AAGTGGAAGC GGTACTACGT GCGAGCGTGG CTGCTTATGG TTACAGTGAG ATCCGCACTC CAATAGTGGA AAATACCGAT CTTTTTAAAC GCTCTATCGG TGAAGTGACT GATATTGTTG AAAAAGAAAT GTATACCTTC GAGGACCGTA ACGGTGACAG TTTAACCCTA CGTCCTGAAG GCACCGCCTC AACCGTGCGT GCGGGTAATG AGCATGGTCT GCTCTATAAC CAAGAACAAC GCTTGTGGTA CATGGGCCCA ATGTTCCGCC ACGAACGTCC ACAAAAAGGC CGTTACCGCC AATTCCACCA GTTTGGTGTG GAAGTCTACG GTATTGGTAG CGCCGATATC GACGCCGAAG TGTTGATGTT ATCGGCCCGT CTATGGGAAA AACTCGGCAT TAGCGAGCAT GTGACGCTTG AGCTGAATAC CTTAGGCGAT CCCGCTGAGC GCGCCGCTTA CCGTGAAGCC TTGATTGCCT TCTTAGAGCA ACACAAGGAC AAATTGGACG AAGATAGCCA GCGCCGTATG TACAGCAATC CGCTGCGCGT ACTGGACTCA AAAGATCCTC AAGTGCAAAG CATTTTAGGC GATGCGCCTG CGCTGATGGA TTACTTAGGT CAAGAATCTT CACAACATTT TGCACAATTG CGTGAACTCC TCGACGCGGT TGGCATCCAA TACCGAGTTA ACCCGCGCTT AGTCCGTGGT TTAGATTACT ACAATCGCAC GGTTTTTGAA TGGGTTACCA ATAGCTTAGG CTCTCAAGGT ACTGTTCTTG CGGGCGGTCG CTACGATGGT TTAGTCGCTC AATTGGGCGG TAAAGATACG CCTGCCGTCG GTTTTGCGAT GGGATTAGAG CGCATCGTTC TGCTGCTTGA AACCTTAGAG CTGACCCAAG ATATCCCTGC GGCTGTCGAT GTGTATGTCG CGGCGATGGG GGATAGCTGC TTGGTTGAAG CCATTAAAGT GGCACAGGAG CTACGCTCAA CCTTACCGAC ACTGCGTGTC ATGAGCCACT GCGGCGGCGG TAACTTCAAG AAGCAAATTA AGCGTGCCGA TAAAAGCGGC GCACAAGTGG CCTTACTCAT CGGTGAAGAA GAACTCGCCG AAGGTGTGGT TACCGTTAAA TATTTACGCA ATGACAACGA ACAACAACGG GTCGCTCGAA ATGCACTAAG CGCATTTTTA GCTGAACTTA CCAAATAA
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Protein sequence | MAKQIQAIRG MNDILPTQSP LWQKVEAVLR ASVAAYGYSE IRTPIVENTD LFKRSIGEVT DIVEKEMYTF EDRNGDSLTL RPEGTASTVR AGNEHGLLYN QEQRLWYMGP MFRHERPQKG RYRQFHQFGV EVYGIGSADI DAEVLMLSAR LWEKLGISEH VTLELNTLGD PAERAAYREA LIAFLEQHKD KLDEDSQRRM YSNPLRVLDS KDPQVQSILG DAPALMDYLG QESSQHFAQL RELLDAVGIQ YRVNPRLVRG LDYYNRTVFE WVTNSLGSQG TVLAGGRYDG LVAQLGGKDT PAVGFAMGLE RIVLLLETLE LTQDIPAAVD VYVAAMGDSC LVEAIKVAQE LRSTLPTLRV MSHCGGGNFK KQIKRADKSG AQVALLIGEE ELAEGVVTVK YLRNDNEQQR VARNALSAFL AELTK
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