| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1299 |
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| Symbol | ispG |
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| ID | 4258031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1504583 |
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| End bp | 1505698 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638121932 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_737355 |
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| Protein GI | 114046805 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.997086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATAACG AAACACCCAT AAAGAGACGT CCTTCAACCC GCATTTATGT GGGCAATGTG
CCGATTGGTG ATGGTGCGCC GATTGCCGTT CAGTCGATGA CTAACACTAA GACCACAGAT
GTTGAGGCAA CTGTTGCCCA AATCCGTGCC CTAGAAAAAG TGGGTGCCGA TATTGTGCGT
GTCTCTGTGC CGACGATGGA CGCCGCCGAA GCCTTTAAAG TGATTAAGCA ATCAGTATCT
GTGCCCTTGG TTGCCGATAT CCACTTCGAT TACCGTATTG CCCTGAAAGT GGCCGAATAT
GGTGTGGACT GTTTGCGTAT CAACCCAGGT AATATCGGTA ACGAAGAGCG TATCCGCAGT
GTGGTGGAGT GCGCCCGCGA TAAAAACATT CCTATCCGTA TTGGGGTGAA CGGCGGTTCA
TTAGAAAAAG ATCTGATGGA CAAATACAAA GAACCTACGC CGGAAGCCTT ACTCGAATCG
GCTATGCGCC ATGTGGACAT TCTCGACCGT TTGAACTTCG ACCAATTTAA GGTCAGCGTC
AAAGCCTCCG ATGTGTTCTT GGCGGTAGAA TCCTATCGCT TATTGGCCAA GCAAATTCGT
CAGCCATTGC ATTTAGGTAT TACTGAAGCG GGTGGCGCCC GTGCGGGGGC GGTCAAATCT
GCCGTCGGTT TGGGTATGCT GCTTGCTGAG GGCATTGGTG ATACGCTGCG TATTTCGTTG
GCGGCCGATC CGGTGGAAGA AATCAAAGTT GGCTTTGATA TCCTAAAGTC ACTGCGTATC
CGTAGCCGTG GCATTAACTT TATTGCGTGT CCTTCTTGCT CGCGTCAAGA GTTTGATGTG
ATCAGCACGG TAAATGAATT AGAGCGCCGC CTCGAAGATG TGACGACCGC GATGGATGTG
TCTATCATCG GCTGTGTGGT CAATGGCCCA GGCGAAGCCT TAGTGTCTCA CATCGGCTTA
ACCGGTGGAC ATCGTAAGAG TGGTTACTAC GATGAAGGCG AGCGTCAAAA AGAGCGTTTC
GACAATGATA ACCTAGTCGA TTCCCTCGAA GCGAAAATTC GCGCTAAGGC GAGCCAAATG
GCTAACCGCA TCCAAGTGAA AGACACGACT GAGTAA
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| Protein sequence | MYNETPIKRR PSTRIYVGNV PIGDGAPIAV QSMTNTKTTD VEATVAQIRA LEKVGADIVR
VSVPTMDAAE AFKVIKQSVS VPLVADIHFD YRIALKVAEY GVDCLRINPG NIGNEERIRS
VVECARDKNI PIRIGVNGGS LEKDLMDKYK EPTPEALLES AMRHVDILDR LNFDQFKVSV
KASDVFLAVE SYRLLAKQIR QPLHLGITEA GGARAGAVKS AVGLGMLLAE GIGDTLRISL
AADPVEEIKV GFDILKSLRI RSRGINFIAC PSCSRQEFDV ISTVNELERR LEDVTTAMDV
SIIGCVVNGP GEALVSHIGL TGGHRKSGYY DEGERQKERF DNDNLVDSLE AKIRAKASQM
ANRIQVKDTT E
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