Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1298 |
Symbol | |
ID | 4258030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1503411 |
End bp | 1504541 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638121931 |
Product | hypothetical protein |
Protein accession | YP_737354 |
Protein GI | 114046804 |
COG category | [S] Function unknown |
COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.445339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGATA ACGAAATAAA CGCGTCAGTA GAACCAGTAG CAGCGAGTGA AGCTGAATCG ACGCCTGATG TAACGCTCGG CACTGTACTC AGAACGGCCC GTGAGCAGAT GGGCTTAAGC ATTGCGGATA CCGCGGTGAA GTTGCACTTG CGCCCAGGGA TTGTTGAAAA TCTCGAAGCC GACGATTTTT CCAATATTTC TTCTTCGACT TATGTTCGCG GATACGTCAA AAATTATGCG CGCATGCTGG GGGTGGACAA CGCCCTGATT GAGGCATGCC TCGCGCGGCA GGTGCCCTTA GTCACACAGC CTGCGATGCA AAGCTTTTCC CGTAAGACGA CCTATCAAGC TCGTGACACT AAATTGAAGT GGCTGAGCTT TTTTATTGTC ATAGTGTTAC TGGGCTTGTT CGTCCTATGG TGGATGCAAA GAACTACGCT GGTGACCCAT GTCGATATCT CTAAACCGAC TGCAGAAGAG TTAGCTGCCG CCAGTCAAAC CCTACCGGGC GATGTTCTGC TGACGGAAAC CGACGCGAGC GAGCGCTTAA GCGAGATTGC GGTCAATGGC TCTATGGCGA CCGATGGTCC GGTAAAAGAT ACCGACGAGA GCACTGTCGA CCCTAATATG AACGATACGG CAGCGATGGA AGCGGAGCAG ACGCCTGCTG CCAATTCGGC TATGAATACG AGCGAATCTA ACACCGCACT GATGAACAAT GCTTCTAGCA CTGCGCCGAC CTCAGGAGCG AGTAATATCG TTGCGGTTCC AAACGCGACA CAAAATGGCG CGACCAATAC CGCGCCGGTG CAGAACCAAA CTGCATCGAA TGCACCTGCA ACCAATACAG CTTCTACAGC GCAAGCCATG CCATTGGCTG CAGGGCAGTC GAGCATTACT ATTGAGCTCA CGGGCGATTG CTGGATCAAC ATAGTCGATG CCAAGGGCAA AGCGATTGTT GACGGCGTCC GTGGTGCTGG TTCGAATATT CAAGCCAGTG GCGTGCCTCC GTTTAAAGTG ATCTTAGGTG CTCCCACTGT CGTGTCCACG TTTACGGTCG ATGGTAAAGC CATCAGCCTT GCTGAATTTC CTAAGGGTCG TGTTGCGCGT TTGACTATCC CACAGGTTTA A
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Protein sequence | MKDNEINASV EPVAASEAES TPDVTLGTVL RTAREQMGLS IADTAVKLHL RPGIVENLEA DDFSNISSST YVRGYVKNYA RMLGVDNALI EACLARQVPL VTQPAMQSFS RKTTYQARDT KLKWLSFFIV IVLLGLFVLW WMQRTTLVTH VDISKPTAEE LAAASQTLPG DVLLTETDAS ERLSEIAVNG SMATDGPVKD TDESTVDPNM NDTAAMEAEQ TPAANSAMNT SESNTALMNN ASSTAPTSGA SNIVAVPNAT QNGATNTAPV QNQTASNAPA TNTASTAQAM PLAAGQSSIT IELTGDCWIN IVDAKGKAIV DGVRGAGSNI QASGVPPFKV ILGAPTVVST FTVDGKAISL AEFPKGRVAR LTIPQV
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