Gene Shewmr7_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1298 
Symbol 
ID4258030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1503411 
End bp1504541 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content52% 
IMG OID638121931 
Producthypothetical protein 
Protein accessionYP_737354 
Protein GI114046804 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.445339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATA ACGAAATAAA CGCGTCAGTA GAACCAGTAG CAGCGAGTGA AGCTGAATCG 
ACGCCTGATG TAACGCTCGG CACTGTACTC AGAACGGCCC GTGAGCAGAT GGGCTTAAGC
ATTGCGGATA CCGCGGTGAA GTTGCACTTG CGCCCAGGGA TTGTTGAAAA TCTCGAAGCC
GACGATTTTT CCAATATTTC TTCTTCGACT TATGTTCGCG GATACGTCAA AAATTATGCG
CGCATGCTGG GGGTGGACAA CGCCCTGATT GAGGCATGCC TCGCGCGGCA GGTGCCCTTA
GTCACACAGC CTGCGATGCA AAGCTTTTCC CGTAAGACGA CCTATCAAGC TCGTGACACT
AAATTGAAGT GGCTGAGCTT TTTTATTGTC ATAGTGTTAC TGGGCTTGTT CGTCCTATGG
TGGATGCAAA GAACTACGCT GGTGACCCAT GTCGATATCT CTAAACCGAC TGCAGAAGAG
TTAGCTGCCG CCAGTCAAAC CCTACCGGGC GATGTTCTGC TGACGGAAAC CGACGCGAGC
GAGCGCTTAA GCGAGATTGC GGTCAATGGC TCTATGGCGA CCGATGGTCC GGTAAAAGAT
ACCGACGAGA GCACTGTCGA CCCTAATATG AACGATACGG CAGCGATGGA AGCGGAGCAG
ACGCCTGCTG CCAATTCGGC TATGAATACG AGCGAATCTA ACACCGCACT GATGAACAAT
GCTTCTAGCA CTGCGCCGAC CTCAGGAGCG AGTAATATCG TTGCGGTTCC AAACGCGACA
CAAAATGGCG CGACCAATAC CGCGCCGGTG CAGAACCAAA CTGCATCGAA TGCACCTGCA
ACCAATACAG CTTCTACAGC GCAAGCCATG CCATTGGCTG CAGGGCAGTC GAGCATTACT
ATTGAGCTCA CGGGCGATTG CTGGATCAAC ATAGTCGATG CCAAGGGCAA AGCGATTGTT
GACGGCGTCC GTGGTGCTGG TTCGAATATT CAAGCCAGTG GCGTGCCTCC GTTTAAAGTG
ATCTTAGGTG CTCCCACTGT CGTGTCCACG TTTACGGTCG ATGGTAAAGC CATCAGCCTT
GCTGAATTTC CTAAGGGTCG TGTTGCGCGT TTGACTATCC CACAGGTTTA A
 
Protein sequence
MKDNEINASV EPVAASEAES TPDVTLGTVL RTAREQMGLS IADTAVKLHL RPGIVENLEA 
DDFSNISSST YVRGYVKNYA RMLGVDNALI EACLARQVPL VTQPAMQSFS RKTTYQARDT
KLKWLSFFIV IVLLGLFVLW WMQRTTLVTH VDISKPTAEE LAAASQTLPG DVLLTETDAS
ERLSEIAVNG SMATDGPVKD TDESTVDPNM NDTAAMEAEQ TPAANSAMNT SESNTALMNN
ASSTAPTSGA SNIVAVPNAT QNGATNTAPV QNQTASNAPA TNTASTAQAM PLAAGQSSIT
IELTGDCWIN IVDAKGKAIV DGVRGAGSNI QASGVPPFKV ILGAPTVVST FTVDGKAISL
AEFPKGRVAR LTIPQV