Gene Shewmr7_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1296 
Symbol 
ID4258028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1501472 
End bp1502593 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content49% 
IMG OID638121929 
Productribosomal RNA large subunit methyltransferase N 
Protein accessionYP_737352 
Protein GI114046802 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.499019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAA AAAAGATCAA TTTATTAGAC CTTGATCGTA AGGCGATGCG CGCATTATTT 
GCGGATCTGG GTGAGAAGCC TTTCCGTGCC GATCAGCTGA TGAAATGGAT CTATCATTTC
GGTGTCAGTG ACTTCGAAGA AATGACTAAC ATCAACAAAG TGTTACGCCA AAAGCTGGCG
GCGCGCTGTG AGATTGTGGC GCCTGAGATT TCAAGCTATC AAAAATCCAC TGATGGCACC
ATTAAGTTCG CCATCCATGT CGGCGAAGGC CAAGAAGTCG AAACCGTGTA TATTCCCGAA
GATGACCGCG CCACTCTGTG TGTGTCGTCT CAAGTGGGCT GCGCCCTGGA ATGTACTTTC
TGCTCGACTG CGCAGCAAGG CTTTAACCGC AACTTAACTG TCTCTGAAAT CGTCGGCCAA
ATTTGGCGTG TTTCCCATTT CTTAGGGTTT GCTAAAGATA CCGGCGAGCG CCCAATCACC
AACGTAGTGA TGATGGGCAT GGGTGAACCG CTGCTGAACC TAGCTAACGT GATCCCGGCG
ATGGATATCA TGCTGGATGA CTTCGGTTTT AGCCTGTCAA AACGCCGTGT GACCCTGTCA
ACTTCGGGTG TCGTGCCAGC ATTAGATAAA CTCGGTGATG CCCTCGATGT GGCGCTCGCC
GTGAGTATCC ACGCGCCAAA CGATGAACTG CGCGATATTC TGGTTCCGGT GAATAAAAAG
TATCCATTGC AAGAGTTCCT TGCGGGGATC CGCCGTTACA TCGCCAAATC TAACGCTAAC
CGTGGCCGCG TGACTGTGGA GTATGTGATG CTCGATCACA TCAACGACAG CACTGAACAA
GCCCATGAGT TAGCACAATT AATGAAGGAT ACGCCCTGCA AGGTTAACCT GATCCCATTC
AATCCATACC CAGGTTCACC CTATGGTCGT TCATCGAACT CGCGCATCGA CCGTTTTTCT
AAGGTATTGA TGGAATATGG CTTAACTGTG ATTGTGCGTA AGACCCGTGG CGACGATATT
GATGCGGCCT GTGGGCAGTT AGCGGGAGAT ATTCGCGATC GAACCAAGCG TTTAGCAAAA
AAACGCATGC AAGAAAATCA GATTTCGGTC ACAATGAATT AA
 
Protein sequence
MSEKKINLLD LDRKAMRALF ADLGEKPFRA DQLMKWIYHF GVSDFEEMTN INKVLRQKLA 
ARCEIVAPEI SSYQKSTDGT IKFAIHVGEG QEVETVYIPE DDRATLCVSS QVGCALECTF
CSTAQQGFNR NLTVSEIVGQ IWRVSHFLGF AKDTGERPIT NVVMMGMGEP LLNLANVIPA
MDIMLDDFGF SLSKRRVTLS TSGVVPALDK LGDALDVALA VSIHAPNDEL RDILVPVNKK
YPLQEFLAGI RRYIAKSNAN RGRVTVEYVM LDHINDSTEQ AHELAQLMKD TPCKVNLIPF
NPYPGSPYGR SSNSRIDRFS KVLMEYGLTV IVRKTRGDDI DAACGQLAGD IRDRTKRLAK
KRMQENQISV TMN