Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1294 |
Symbol | |
ID | 4258026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1498387 |
End bp | 1500138 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121927 |
Product | metallophosphoesterase |
Protein accession | YP_737350 |
Protein GI | 114046800 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.260824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGG GATACACACT CTCACTCGCG CACATCAACG ATACCCATTC GAATTTTGAG CCCAGCCGCG TACAATTTTC CCTCAATCTA GGGCTTAAAG CCTTAGATAT CACCAGTCAC AGCGGTGGCT ATGCACGTCT AGGGTATCAG ATTAGTCAGG CACGTGACCG CGCCGCACAA AGCCAAATGC CATTTTTATT TTTGCATGGT GGCGACAGTT TCCAAGGCAC GCTGTATTTC AGCCATTTTA AGGGTAAGGC CAACGCCCAT CTGCTGAATT TACTCGCACC CGATGCCATG GTGATTGGTA ATCACGATAT TGATGAAGGT AATGCGCGGC TCGCCGAATT TGCCAAGCAA ATCGATTTTC CGCTGCTAGC GGGGAATATG GACTTGAGCC AAGAGGATAT ACGCAAGCCG GGTAACCTGC GTACTGTGGC GAATATTCTC GCCTATGATG AGACTACTCA GCTTGCCAGC TACCTCGAAA AGCCCTTCTA CGACAAAAAG CTCGCCGTCA TCGGCATTAC TCTGGATCAG ATGAAAGACA TCGCCAGACC CGATCCCGAT ACCCACTTTG TCGATGCAAT TGCGACCACG GCGCGCACCG TCGAGCATCT GCATGCTAAA GGCATCAAGC ACATTATTGT GCTGAGTCAC TTAGGCTTAG ATCAGGATAA AAGGCTTGCC GAACAAGTCG ATGGCATCAG TCTTATCGTC GGCGGCCATA CCCATACCTT GCAGGGCGAT TTTAGTGCCT TGGGGTTAAG CAATATTCCC TATGGTGAAA TGGTCAATGG CACTCCTATC GTGCATGCGG GGAAATACGC CGAAACCTTA GGCTTGGCCG AGATTGAATT TGATGCAGCT GGCCGCGCGA TAAACCTAAA GGGTGGCAAC TACTTTATGC TCGATAAACA GTTTATGTTG AGTTCGAGTG AGCAAGTGGA TGACACCGAC TATCAAGCCG TGCAGCAACG TTTTAATGAG CATCCCTATG TATTGTGGGA TGCTGCCGAT GAAGACATTC ACGGCGTGAT CCACGATATC TATCGCCCCG CGATTGCCGA GATGGAAAAC AAAGTCTTAG CCCTTGTGCC TAAGAATCTA GTGCATACCA GACTGCCATC TAAGGCATTA CCCCATGGCA GCGAAATCGC CCCTTGGGTA AGCCGCAGTA TGTTCCAAGA GGCCAAACTT GAAGATCCCC GCATCCACTT TGCCCTACAT AACGCCGGCG GAGTGCGGCA ATCGGTCGCC CAAGGCAGGC TCACCCTCGC CGATGTGTTA GGGCAATTGC TGCCCTTCGA ATTGCCATTA GTCAAATACG AAATCCAAGG CCAGTATTTA TACCAAGCGC TGGAGTCGGC GATTAACGCC GCGACAAACA ACAGTGTGCG CGGCACGGGT GCGGGCAGCT TCCCCTATAC CTATGGATTA CGTTATTACT ACGATGGTAG ACGCCCATTA GGGGAACGTT TGTTCAAGCT TGAAATGATG CAGCAAGATG GCTTATCACT CTGGTATCCA GTGCAGCCCG ATGCGCTCTA TGTGGGGGTT TCTACCTCCT ATACCGCCGC GGGGAAAGAA GGTTATCACC CACTGTTACA GGCACGCTGG CAGGAGTCGA TTGAAACGCT CACCCTACCA CAGGCTTTTA TTCGCTTCCT CAATCGGGCG CCCAACCCCA ATTTAGCGGA TTTGCTCTCC CCCCATGTGC ATTACACCAG CCATATAAAG CGCTCAGTGT AA
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Protein sequence | MTQGYTLSLA HINDTHSNFE PSRVQFSLNL GLKALDITSH SGGYARLGYQ ISQARDRAAQ SQMPFLFLHG GDSFQGTLYF SHFKGKANAH LLNLLAPDAM VIGNHDIDEG NARLAEFAKQ IDFPLLAGNM DLSQEDIRKP GNLRTVANIL AYDETTQLAS YLEKPFYDKK LAVIGITLDQ MKDIARPDPD THFVDAIATT ARTVEHLHAK GIKHIIVLSH LGLDQDKRLA EQVDGISLIV GGHTHTLQGD FSALGLSNIP YGEMVNGTPI VHAGKYAETL GLAEIEFDAA GRAINLKGGN YFMLDKQFML SSSEQVDDTD YQAVQQRFNE HPYVLWDAAD EDIHGVIHDI YRPAIAEMEN KVLALVPKNL VHTRLPSKAL PHGSEIAPWV SRSMFQEAKL EDPRIHFALH NAGGVRQSVA QGRLTLADVL GQLLPFELPL VKYEIQGQYL YQALESAINA ATNNSVRGTG AGSFPYTYGL RYYYDGRRPL GERLFKLEMM QQDGLSLWYP VQPDALYVGV STSYTAAGKE GYHPLLQARW QESIETLTLP QAFIRFLNRA PNPNLADLLS PHVHYTSHIK RSV
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