Gene Shewmr7_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1292 
Symbol 
ID4258024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1496489 
End bp1496932 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content52% 
IMG OID638121925 
ProductDoxX family protein 
Protein accessionYP_737348 
Protein GI114046798 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0246117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAC TTATCACAAA ATTACTAACC TCTGCCCCAA GTTTCGCCCC ATTGGCCCTG 
CGTATTCCTA TCGGGATCAT CCTCATGGCC CACGGCTCGC AAAAGCTCTT CGGCTGGTTT
GGTGGCTACG GCCTGGAAGG CACAGGACAA TGGATGGCCT CCATCGGCTT AACCCCTGGC
TACTTAATGG CGCTGATGGC GGGCTCGAGC GAATTCTTTG GTGGCTTGCT GATCATTATC
GGTTTACTGA CTCGCCCAAC GGCACTGGTA TTGTCCTTTA CTATGATGGT CGCGATTTTC
TCGGTCCACA TTGGTAACGG TCTGTTCCTC AGCAATAACG GTTATGAATT TGGTTTAGCC
CTGTTAGCTG CTACTGTGTC TCTGGCCGTG TCAGGTGCGG GTAAACTCAG TGCCGACAAC
CTGTTAGCCG CACGCTTAAA ATAA
 
Protein sequence
MKALITKLLT SAPSFAPLAL RIPIGIILMA HGSQKLFGWF GGYGLEGTGQ WMASIGLTPG 
YLMALMAGSS EFFGGLLIII GLLTRPTALV LSFTMMVAIF SVHIGNGLFL SNNGYEFGLA
LLAATVSLAV SGAGKLSADN LLAARLK