Gene Shewmr7_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1288 
Symbol 
ID4258020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1493842 
End bp1494144 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content45% 
IMG OID638121921 
ProductNrfJ-related protein 
Protein accessionYP_737344 
Protein GI114046794 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00755568 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCAA AATTGGTAAA ATTAGCGGCT GTAGCAACTT TAGCGTTAGG TATGTCAAGT 
GCTTGGGCAC AGGGCGTCGT TCATGAAGGT ACTGTGGTTG ATACCATGAA TGGTGGCGGC
TACACCTATG TACAAATTAA AGAAGCTGAC AACACGTTTT GGGCTGCTGG CCCAGAAGCT
GAAGTGAAGA AAGGCGACAA AGTGGCCGTG GTTGAGCAAA TGTGGATGAA TCAATTCACC
AGCAAAACCT TAAACCGCAC CTTCGACAAG CTGTTGTTTG TTGGTCAAAT CGAGAAGAAA
TAA
 
Protein sequence
MMAKLVKLAA VATLALGMSS AWAQGVVHEG TVVDTMNGGG YTYVQIKEAD NTFWAAGPEA 
EVKKGDKVAV VEQMWMNQFT SKTLNRTFDK LLFVGQIEKK