Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1280 |
Symbol | |
ID | 4258170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1486232 |
End bp | 1486771 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638121913 |
Product | hypothetical protein |
Protein accession | YP_737336 |
Protein GI | 114046786 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAACCT CCACTCACGC AGAGTACCAA TCCCATTCGG CTAACGCTCG ACATAGTCTC GCAATATTTG GCACCAGTTT GCTTCTGCTT GCCGCCTTAT TCTTTGGTGC ACAAAATGCT AATGCCAACG AACAAACCAC AGCAACATTG AGCGATGAGC AAGCGGCCGC TCAAGTGCTG GATAAATTGA ATCAATATTC GAGTAGTGCC GACTGGGATA AGTATTTCGC CCTCTATCGG CAGGATGGAA TTTTTATTGG AACAGACGCG ACAGAGCGTT GGGGCATGGC CGAGTTTGAA CGCTATTCGC GTCCGACCAA AGGTTGGCGC TACGATTTAA CTTCGCGCCA TTTAGTGCAG CATGGTGATG TGATCCTGTT CGATGAACTG CTCAACAGTC CAAGTTATGG CGTTAGCCGA GGTACTGGCA CCCTAATCAA AACCAATGGG GAATGGAAAA TTGCCCAATA TCATTTGAGC TTTCCCATCC CCAATGCGAT AGCCAAACAC ATTACCGCAG AAATTAAAAA CGCTCAGTAA
|
Protein sequence | MTTSTHAEYQ SHSANARHSL AIFGTSLLLL AALFFGAQNA NANEQTTATL SDEQAAAQVL DKLNQYSSSA DWDKYFALYR QDGIFIGTDA TERWGMAEFE RYSRPTKGWR YDLTSRHLVQ HGDVILFDEL LNSPSYGVSR GTGTLIKTNG EWKIAQYHLS FPIPNAIAKH ITAEIKNAQ
|
| |