Gene Shewmr7_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1280 
Symbol 
ID4258170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1486232 
End bp1486771 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content48% 
IMG OID638121913 
Producthypothetical protein 
Protein accessionYP_737336 
Protein GI114046786 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCT CCACTCACGC AGAGTACCAA TCCCATTCGG CTAACGCTCG ACATAGTCTC 
GCAATATTTG GCACCAGTTT GCTTCTGCTT GCCGCCTTAT TCTTTGGTGC ACAAAATGCT
AATGCCAACG AACAAACCAC AGCAACATTG AGCGATGAGC AAGCGGCCGC TCAAGTGCTG
GATAAATTGA ATCAATATTC GAGTAGTGCC GACTGGGATA AGTATTTCGC CCTCTATCGG
CAGGATGGAA TTTTTATTGG AACAGACGCG ACAGAGCGTT GGGGCATGGC CGAGTTTGAA
CGCTATTCGC GTCCGACCAA AGGTTGGCGC TACGATTTAA CTTCGCGCCA TTTAGTGCAG
CATGGTGATG TGATCCTGTT CGATGAACTG CTCAACAGTC CAAGTTATGG CGTTAGCCGA
GGTACTGGCA CCCTAATCAA AACCAATGGG GAATGGAAAA TTGCCCAATA TCATTTGAGC
TTTCCCATCC CCAATGCGAT AGCCAAACAC ATTACCGCAG AAATTAAAAA CGCTCAGTAA
 
Protein sequence
MTTSTHAEYQ SHSANARHSL AIFGTSLLLL AALFFGAQNA NANEQTTATL SDEQAAAQVL 
DKLNQYSSSA DWDKYFALYR QDGIFIGTDA TERWGMAEFE RYSRPTKGWR YDLTSRHLVQ
HGDVILFDEL LNSPSYGVSR GTGTLIKTNG EWKIAQYHLS FPIPNAIAKH ITAEIKNAQ