Gene Shewmr7_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1279 
Symbol 
ID4258169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1484761 
End bp1486227 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content47% 
IMG OID638121912 
Productputative signal transduction protein 
Protein accessionYP_737335 
Protein GI114046785 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.013927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACCTA ACAATAATAC TAATAAAGGG GTCGATTATT GGACAAAACG GATCAGTGAA 
TTGGAAATGC CAGCGCTCTG TTCCACAGTC CAAACGTTAG AAAAGCTTGC CAAGGATGAC
GTGTCGTCTC TCGCCTTACT GGGGCGAAGC GTGATGCACG ATAACGCCCT CACATCCCGC
ATCTTACGGG TCGCCAATAG CGCGATTTAC CATAAAGGCA GCACTCAAAT ATCGACAGTG
AGCCGAGCAG CGATAGTGCT AGGGTTTGAT GCCGTGCGTA ATATCTGCAT TACAGCCCAA
TTATTATCGA GCCTTTTAGA GAGCAAGAAT CTTGCCCCCA CCGTTTACCA ACGACTTATC
AAATTAATGG CGAAGGCATT TCAAGCCGCT ATGTTAGCGC GGATGATGCT AAGTGATTAT
GATGAGGATA TTCAGGAAGA AGCCTTTATC GCTTCTTTGC TTTACCACAT AGGTGAGAGT
GCTTTTTGGA GTATCGGTGG CGAGTTCACC GAAGTTTTGG ACAGTCAGCT CTCAGCCTGT
GACACTCTCG CCGATGAGCG CAGCATTATT CGTGAAGCCT TAGGCACCTC ATTTTCGCAG
CTGACGCAGA GTATTGCCCG CCACTGGGGA TTAGGAGAGT TATTGATCCA AGCGGTGAAT
TATCCTGACG ACCAACGTCC TGAAATTCGC TCGATTTTTC TTGCCGATAA GCTCTGTGAA
ATTCTCTCCC AAGAGGTGAT AGATAAAACC GAGTTGGATA AGCGTATCAG CCAAGCCGCT
CATTTTACCG GATTGGATGA GAAAGAATTA ACCCTGAGAA TGCAGCGCTG TACCAAGGCA
ACCCATAAAT TAGCCGAAGC CTATGGCGCC AAGGTGTTGA TTGACTATCT GCCCGATCCT
AAGCGCATCA ATAAGCTTGA GCCTAGTGTT CCTGCAGTTG AGCTCCCCGT GTTTGAGGCC
AATTTAACTG TGCAATTGGC TAAGCTACGT GAACTCACCG CCTTTGCGAT CAACAAAGCC
GATTTCAATC AAATCATGCA AACCGTGCTT GAGGGAATTT TAGAAGGGGT CGGCGTGGAC
CGCTGTGGGG TTTTACTCTT ATCGCCCAGC CGTAAACAGC TTCAACCTAG GATCATGCTT
GGCAGAGATG CCGAGGATAT GAAGCAGCAA TTTATTATCG ATCTGAGCGA TAAGAAAGGG
TTATTTCCGC AGGCGATGGA ACATAAGGAA TGTCTGTGGA TTGATAACCC GAATGCGAAA
AAGTGGCTAG AGCAATGCAA AGAATTAAAG ACTCAGTTGC CGGAGTCTGG GTTTCTGGTG
GCGCCGCTGT TGGTCGATAG TAAAGTGATC GGCTTTTATT ACGCCGATAA GGGGCCTTCA
CAACGAAGCT TTAGCGAAGT GGATTTTCAA GCCTTTATCC ACTTCTCACA GTTGGCCAAT
GTGTGTTTTA CCGTGTCGTT AAAATAG
 
Protein sequence
MKPNNNTNKG VDYWTKRISE LEMPALCSTV QTLEKLAKDD VSSLALLGRS VMHDNALTSR 
ILRVANSAIY HKGSTQISTV SRAAIVLGFD AVRNICITAQ LLSSLLESKN LAPTVYQRLI
KLMAKAFQAA MLARMMLSDY DEDIQEEAFI ASLLYHIGES AFWSIGGEFT EVLDSQLSAC
DTLADERSII REALGTSFSQ LTQSIARHWG LGELLIQAVN YPDDQRPEIR SIFLADKLCE
ILSQEVIDKT ELDKRISQAA HFTGLDEKEL TLRMQRCTKA THKLAEAYGA KVLIDYLPDP
KRINKLEPSV PAVELPVFEA NLTVQLAKLR ELTAFAINKA DFNQIMQTVL EGILEGVGVD
RCGVLLLSPS RKQLQPRIML GRDAEDMKQQ FIIDLSDKKG LFPQAMEHKE CLWIDNPNAK
KWLEQCKELK TQLPESGFLV APLLVDSKVI GFYYADKGPS QRSFSEVDFQ AFIHFSQLAN
VCFTVSLK