Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1279 |
Symbol | |
ID | 4258169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1484761 |
End bp | 1486227 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638121912 |
Product | putative signal transduction protein |
Protein accession | YP_737335 |
Protein GI | 114046785 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.013927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAACCTA ACAATAATAC TAATAAAGGG GTCGATTATT GGACAAAACG GATCAGTGAA TTGGAAATGC CAGCGCTCTG TTCCACAGTC CAAACGTTAG AAAAGCTTGC CAAGGATGAC GTGTCGTCTC TCGCCTTACT GGGGCGAAGC GTGATGCACG ATAACGCCCT CACATCCCGC ATCTTACGGG TCGCCAATAG CGCGATTTAC CATAAAGGCA GCACTCAAAT ATCGACAGTG AGCCGAGCAG CGATAGTGCT AGGGTTTGAT GCCGTGCGTA ATATCTGCAT TACAGCCCAA TTATTATCGA GCCTTTTAGA GAGCAAGAAT CTTGCCCCCA CCGTTTACCA ACGACTTATC AAATTAATGG CGAAGGCATT TCAAGCCGCT ATGTTAGCGC GGATGATGCT AAGTGATTAT GATGAGGATA TTCAGGAAGA AGCCTTTATC GCTTCTTTGC TTTACCACAT AGGTGAGAGT GCTTTTTGGA GTATCGGTGG CGAGTTCACC GAAGTTTTGG ACAGTCAGCT CTCAGCCTGT GACACTCTCG CCGATGAGCG CAGCATTATT CGTGAAGCCT TAGGCACCTC ATTTTCGCAG CTGACGCAGA GTATTGCCCG CCACTGGGGA TTAGGAGAGT TATTGATCCA AGCGGTGAAT TATCCTGACG ACCAACGTCC TGAAATTCGC TCGATTTTTC TTGCCGATAA GCTCTGTGAA ATTCTCTCCC AAGAGGTGAT AGATAAAACC GAGTTGGATA AGCGTATCAG CCAAGCCGCT CATTTTACCG GATTGGATGA GAAAGAATTA ACCCTGAGAA TGCAGCGCTG TACCAAGGCA ACCCATAAAT TAGCCGAAGC CTATGGCGCC AAGGTGTTGA TTGACTATCT GCCCGATCCT AAGCGCATCA ATAAGCTTGA GCCTAGTGTT CCTGCAGTTG AGCTCCCCGT GTTTGAGGCC AATTTAACTG TGCAATTGGC TAAGCTACGT GAACTCACCG CCTTTGCGAT CAACAAAGCC GATTTCAATC AAATCATGCA AACCGTGCTT GAGGGAATTT TAGAAGGGGT CGGCGTGGAC CGCTGTGGGG TTTTACTCTT ATCGCCCAGC CGTAAACAGC TTCAACCTAG GATCATGCTT GGCAGAGATG CCGAGGATAT GAAGCAGCAA TTTATTATCG ATCTGAGCGA TAAGAAAGGG TTATTTCCGC AGGCGATGGA ACATAAGGAA TGTCTGTGGA TTGATAACCC GAATGCGAAA AAGTGGCTAG AGCAATGCAA AGAATTAAAG ACTCAGTTGC CGGAGTCTGG GTTTCTGGTG GCGCCGCTGT TGGTCGATAG TAAAGTGATC GGCTTTTATT ACGCCGATAA GGGGCCTTCA CAACGAAGCT TTAGCGAAGT GGATTTTCAA GCCTTTATCC ACTTCTCACA GTTGGCCAAT GTGTGTTTTA CCGTGTCGTT AAAATAG
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Protein sequence | MKPNNNTNKG VDYWTKRISE LEMPALCSTV QTLEKLAKDD VSSLALLGRS VMHDNALTSR ILRVANSAIY HKGSTQISTV SRAAIVLGFD AVRNICITAQ LLSSLLESKN LAPTVYQRLI KLMAKAFQAA MLARMMLSDY DEDIQEEAFI ASLLYHIGES AFWSIGGEFT EVLDSQLSAC DTLADERSII REALGTSFSQ LTQSIARHWG LGELLIQAVN YPDDQRPEIR SIFLADKLCE ILSQEVIDKT ELDKRISQAA HFTGLDEKEL TLRMQRCTKA THKLAEAYGA KVLIDYLPDP KRINKLEPSV PAVELPVFEA NLTVQLAKLR ELTAFAINKA DFNQIMQTVL EGILEGVGVD RCGVLLLSPS RKQLQPRIML GRDAEDMKQQ FIIDLSDKKG LFPQAMEHKE CLWIDNPNAK KWLEQCKELK TQLPESGFLV APLLVDSKVI GFYYADKGPS QRSFSEVDFQ AFIHFSQLAN VCFTVSLK
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