Gene Shewmr7_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1278 
Symbol 
ID4258168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1483584 
End bp1484597 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content51% 
IMG OID638121911 
ProductL-threonine aldolase 
Protein accessionYP_737334 
Protein GI114046784 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000270333 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGATT TACGCAGTGA TACCGTGACC CAGCCAACAG AGGCGATGCG CTTAGCCATG 
TCGAGGGCTG AAGTAGGTGA TGATGTTTAT GGTGATGATC CGACCGTCAA CAGCTTGCAA
GATATGGCCG CCGAGATGTT TGGCTTTGAG AGTGCGCTGT TTACCGCATC TGGCACTCAG
GCCAATTTGC TCGCGCTGAT GGCACATTGT GAACGTGGAG ATGAATATCT GTGCGGCCAG
CAGGCCCATA ACTATAAATT CGAGGGCGGT GGTGCGGCGG TACTCGGGAG CATTCAGCCG
CAACCGCTGA CCAATCAGCT GGATGGCACC ATTGTCCTGA CCGATATTGA AGCGGCGATT
AAACCCGATG ATATTCACTT CGCGCGCACG CGCTTATTGA GCCTAGAAAA CACTATCGGT
GGCAAGGTAT TACCCCAATC CTATCTTGCT AATGCGCAGG CGCTGGCATT TCAGCGTGGT
TTAAAAATTC ACTTAGATGG CGCTCGGGTT GCTAATGCCG CCGTGGCCCA GGGGATTGGG
ATTGCCGATA TTGCGGGGCA TTTTGATTCT GTCTCCATCT GTTTATCCAA GGGGTTGTGT
GCGCCTGTTG GCTCACTGCT CTTAGGTGAT GAGCGCCTAA TTAAAAAGGC CACGCGCTGG
CGTAAAATGC TGGGCGGCGG TATGCGCCAG GCGGGGATAT TAGCGGCTGC GGGTAAATTA
GCCCTCATCG AACAAGTTGA GCGATTAGGG GAAGATCATG AGAATGCTGC GTATTTTGCT
CAGCAATTAA GTTTGTTGAG TGAGTTTGAA ATCGATTTGG CCGCCGTTCA AACCAATATG
GTGTTTGCTA ACTTAGCGCC CCATGTCGAT GAGCAAGCCC TAGCGAAACG TTGCCGTGAG
GCGGGGATCC TCATCAGCCC TAGCCGTACC CTGCGTTTTG TGACCCATAA AGATGTCTCG
CGTCAGGACA TTGATAAAGT GCTGCAAGTG TTTAAATTAC ATTTGCAGGT ATAA
 
Protein sequence
MIDLRSDTVT QPTEAMRLAM SRAEVGDDVY GDDPTVNSLQ DMAAEMFGFE SALFTASGTQ 
ANLLALMAHC ERGDEYLCGQ QAHNYKFEGG GAAVLGSIQP QPLTNQLDGT IVLTDIEAAI
KPDDIHFART RLLSLENTIG GKVLPQSYLA NAQALAFQRG LKIHLDGARV ANAAVAQGIG
IADIAGHFDS VSICLSKGLC APVGSLLLGD ERLIKKATRW RKMLGGGMRQ AGILAAAGKL
ALIEQVERLG EDHENAAYFA QQLSLLSEFE IDLAAVQTNM VFANLAPHVD EQALAKRCRE
AGILISPSRT LRFVTHKDVS RQDIDKVLQV FKLHLQV