Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1278 |
Symbol | |
ID | 4258168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1483584 |
End bp | 1484597 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121911 |
Product | L-threonine aldolase |
Protein accession | YP_737334 |
Protein GI | 114046784 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000270333 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGATT TACGCAGTGA TACCGTGACC CAGCCAACAG AGGCGATGCG CTTAGCCATG TCGAGGGCTG AAGTAGGTGA TGATGTTTAT GGTGATGATC CGACCGTCAA CAGCTTGCAA GATATGGCCG CCGAGATGTT TGGCTTTGAG AGTGCGCTGT TTACCGCATC TGGCACTCAG GCCAATTTGC TCGCGCTGAT GGCACATTGT GAACGTGGAG ATGAATATCT GTGCGGCCAG CAGGCCCATA ACTATAAATT CGAGGGCGGT GGTGCGGCGG TACTCGGGAG CATTCAGCCG CAACCGCTGA CCAATCAGCT GGATGGCACC ATTGTCCTGA CCGATATTGA AGCGGCGATT AAACCCGATG ATATTCACTT CGCGCGCACG CGCTTATTGA GCCTAGAAAA CACTATCGGT GGCAAGGTAT TACCCCAATC CTATCTTGCT AATGCGCAGG CGCTGGCATT TCAGCGTGGT TTAAAAATTC ACTTAGATGG CGCTCGGGTT GCTAATGCCG CCGTGGCCCA GGGGATTGGG ATTGCCGATA TTGCGGGGCA TTTTGATTCT GTCTCCATCT GTTTATCCAA GGGGTTGTGT GCGCCTGTTG GCTCACTGCT CTTAGGTGAT GAGCGCCTAA TTAAAAAGGC CACGCGCTGG CGTAAAATGC TGGGCGGCGG TATGCGCCAG GCGGGGATAT TAGCGGCTGC GGGTAAATTA GCCCTCATCG AACAAGTTGA GCGATTAGGG GAAGATCATG AGAATGCTGC GTATTTTGCT CAGCAATTAA GTTTGTTGAG TGAGTTTGAA ATCGATTTGG CCGCCGTTCA AACCAATATG GTGTTTGCTA ACTTAGCGCC CCATGTCGAT GAGCAAGCCC TAGCGAAACG TTGCCGTGAG GCGGGGATCC TCATCAGCCC TAGCCGTACC CTGCGTTTTG TGACCCATAA AGATGTCTCG CGTCAGGACA TTGATAAAGT GCTGCAAGTG TTTAAATTAC ATTTGCAGGT ATAA
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Protein sequence | MIDLRSDTVT QPTEAMRLAM SRAEVGDDVY GDDPTVNSLQ DMAAEMFGFE SALFTASGTQ ANLLALMAHC ERGDEYLCGQ QAHNYKFEGG GAAVLGSIQP QPLTNQLDGT IVLTDIEAAI KPDDIHFART RLLSLENTIG GKVLPQSYLA NAQALAFQRG LKIHLDGARV ANAAVAQGIG IADIAGHFDS VSICLSKGLC APVGSLLLGD ERLIKKATRW RKMLGGGMRQ AGILAAAGKL ALIEQVERLG EDHENAAYFA QQLSLLSEFE IDLAAVQTNM VFANLAPHVD EQALAKRCRE AGILISPSRT LRFVTHKDVS RQDIDKVLQV FKLHLQV
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