Gene Shewmr7_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1272 
Symbol 
ID4258162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1479061 
End bp1479375 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content47% 
IMG OID638121905 
Producthypothetical protein 
Protein accessionYP_737328 
Protein GI114046778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000428708 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTGGT TCATTAGTGC ATTGATTGTG GCATCGGCGA TTTTCTGGTT AGCCCCGCAA 
AAAGTCTCTG CCGATACCCA TAACAGTAAG CTCACACCTC ATCTCCCCAT GATGTTGCTT
TTTTTGCCTT TAGTCGTATT GAGTTGGCTC GTCTTTGAGA CTGTATCGAA TGGGGTGAAT
TACACTACGG TTGCCGCCTT TGGGTTTGTT GCCACCGCTT GCTTAATCGC CCTCCCTAAA
TTGCATCGTT TTATCATGCC CTGCGCCCTA CTTACCGCAT TGGCATTAAT CGCTATGGTA
TTGCAGCATC TCTAA
 
Protein sequence
MYWFISALIV ASAIFWLAPQ KVSADTHNSK LTPHLPMMLL FLPLVVLSWL VFETVSNGVN 
YTTVAAFGFV ATACLIALPK LHRFIMPCAL LTALALIAMV LQHL