Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1258 |
Symbol | |
ID | 4258183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1468363 |
End bp | 1469520 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638121891 |
Product | putative oxygen-independent coproporphyrinogen III oxidase |
Protein accession | YP_737314 |
Protein GI | 114046764 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0161407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGTGA ATGTGTCACC TCAGTTAACC CTGCCGCCGT TGAGCTTGTA CATCCATATC CCTTGGTGTG TACAAAAATG CCCTTACTGC GACTTTAACT CCCATGGACA AAATGGCGAA TTACCCCAGC AGGCCTATGT GGATGCGCTG CTAGCGGACT TACGCCAAGA CTTGCACTTA GTACAAGGCC GTAAGCTGCA CACTATTTTT ATTGGTGGTG GAACGCCGTC TCTGTTTGAT GCCAATCAAA TCAAACGGAT ATTGGATGGC GCCAATGCGC TAATCCCCTT TAGTGACGAT ATTGAAATCA CCATGGAAGC CAACCCTGGT ACCCTAGAGC ACGATGACTT TAGTGCCTAC CGCGCCGCCG GGGTCACCCG ATTATCCATT GGGGTACAAA GCTTCTCTAA GGATAAGCTC AATCTACTAG GACGGATCCA CGATCAAAAC GAAGCCCAAA CTGCCGCCCA AAAAGCCAGC CAAGCGGGTT ATTTAAGTTT TAACTTGGAT TTGATGCACG GACTTCCCAA TCAAAGTTTT GCTGAGGCCA TGGCGGATAT AGATACCGCG GCGGCGCTCA ATCCGCCGCA TTTGTCTTGG TATCAACTGA CGATTGAGCC CAATACCCTG TTCCACTCAA AACCGCCGCA ACTACCCGAC GATGAAGATC TCTGGCAGAT CTACGAACAA GGGCAACAAA AGTTAGCGGC ACTCGGTTAT GAGCAGTATG AAATCTCTGC CTATGCCAAA CCCGGCTATC AATGCAGGCA TAACCTTAAC TATTGGCAGT TTGGCGATTA TTTAGGCATA GGCTGCGGTG CCCATGGCAA AGTGACCTTG CCCGAAGAGA ACCGCATTAT TCGCACGGTT AAAATCAAAC ACCCTAAGGG TTATTTAGCT GCCGACAACT ATCACTTCGA GCAGACTGAG GTCGCCGAAG AAGATCGCGC CCTCGAATAC TTGATGAATC GTCTGCGCTT AATGACGCCT ATCCCTAAGC AAGAGTTTGA AGACAGAACC GGTTTACACC GAGATACGTT GAAAGAGGGA ATGGAAAAGG CCAAACAACG GGGTTTACTG ACCGAATCGG CTGAACATTG GCAATTAACC AGTAAAGGTC ACATGTTTGT GAACGATTTG CTGACGCAAT TTTGTTAA
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Protein sequence | MSVNVSPQLT LPPLSLYIHI PWCVQKCPYC DFNSHGQNGE LPQQAYVDAL LADLRQDLHL VQGRKLHTIF IGGGTPSLFD ANQIKRILDG ANALIPFSDD IEITMEANPG TLEHDDFSAY RAAGVTRLSI GVQSFSKDKL NLLGRIHDQN EAQTAAQKAS QAGYLSFNLD LMHGLPNQSF AEAMADIDTA AALNPPHLSW YQLTIEPNTL FHSKPPQLPD DEDLWQIYEQ GQQKLAALGY EQYEISAYAK PGYQCRHNLN YWQFGDYLGI GCGAHGKVTL PEENRIIRTV KIKHPKGYLA ADNYHFEQTE VAEEDRALEY LMNRLRLMTP IPKQEFEDRT GLHRDTLKEG MEKAKQRGLL TESAEHWQLT SKGHMFVNDL LTQFC
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