| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1239 |
|---|
| Symbol | |
|---|
| ID | 4258723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 1450853 |
|---|
| End bp | 1452103 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638121868 |
|---|
| Product | amine oxidase |
|---|
| Protein accession | YP_737295 |
|---|
| Protein GI | 114046745 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2907] Predicted NAD/FAD-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA TTGCCATTGT AGGGACGGGA ATTTCAGGGC TGACCTGTGG CTATCTACTC
AGCCAATCCC ACAAGGTTAC TGTGTTTGAG GCCAATGACT ATATAGGCGG CCATACCGCG
ACCGTGGATG TGGAGCATCT TGGTAAACAC TATGCAATAG ACACTGGTTT TATCGTGTTT
AACGACCGAA CCTATCCCCG TTTTGAGCGG CTGCTAGCCC GTTTAAATGT CAGTATTTTG
CCGACTGAAA TGAGTTTTAG TGTGCACAAC GCCCTAACGG GGCTTGAGTA CAATGGACAT
AACTTTGCCA GTTTGTTTGC CCAAAAGCGT AACCTCCTGA ATCCGCGCTT TTGGGCCTTT
TTAAATGAAA TTGTGCGCTT TAATAAAAGC TGCAAGGCGA TTTATCAGCA GGATAATTAC
CCCGCTGGCA ACTTGGGTGA GTTTCTCGAC CGCGAGCAGT TTTCTCACTT TTTTGCCGAA
CATTATATTT TGCCCATGGG CGCGGCAATT TGGTCATCGA GCATCGAAGA TATGCGCGCC
TTTTCGCTGC GCTTCTTTAT CCGTTTCTTT GAGCACCATG GCTTATTAAA CGTCAGTAAC
AGACCGCAAT GGTATGTGCT TAAGGGCGGC TCACGCAGTT ATATACCGGA TTTAATTGCC
CCTTTTAAAG ACAATCTGCA TTTAAACAGT CCAGTGAGTG CCATCGAACG CCATGCTGAG
GGCGTTAAAC TCTATGTGAA TGGTGAGTGG CAGGAATTCG ATGAGGTGAT CCTCGCTTGT
CATAGCGACC AAGCGCTTAA GATGTTAACC GATGCCAGCT CGGCCGAAAA AGCGATTCTG
GGTGACTTGC AGTATCAAAA TAACGAGGTG GTTTTACATA CAGATACCAA CCTTTTACCT
AAGCGCAAGG CGGCGTGGGC CAGCTGGAAT TATCGTTTGG ATGGCAATCA AAAACGCCCC
GCCTCTGTGA CTTACAATAT GAATATTCTG CAGCGCCTAC CAAGCGACGC GCCAACCTTT
TGCGTAACGC TTAACCAGAC AGAGCTGATT GACGAAGCCA AAATTCTGCG CCGTTTTAAC
TATGCGCACC CTGTGTTTAA TGAGCAGAGT TTGCAGGCGC AGGCGCGCCG GGAAGAAATC
TCGGGACAAA ACCATACCCA TTTTGCGGGC GCCTATTGGC ACAATGGTTT CCATGAAGAC
GGTGTCCGCA GCGCCTTAGA TGTGTGCGCT CACTTTGGGG TTACGCTATG A
|
|---|
| Protein sequence | MKNIAIVGTG ISGLTCGYLL SQSHKVTVFE ANDYIGGHTA TVDVEHLGKH YAIDTGFIVF
NDRTYPRFER LLARLNVSIL PTEMSFSVHN ALTGLEYNGH NFASLFAQKR NLLNPRFWAF
LNEIVRFNKS CKAIYQQDNY PAGNLGEFLD REQFSHFFAE HYILPMGAAI WSSSIEDMRA
FSLRFFIRFF EHHGLLNVSN RPQWYVLKGG SRSYIPDLIA PFKDNLHLNS PVSAIERHAE
GVKLYVNGEW QEFDEVILAC HSDQALKMLT DASSAEKAIL GDLQYQNNEV VLHTDTNLLP
KRKAAWASWN YRLDGNQKRP ASVTYNMNIL QRLPSDAPTF CVTLNQTELI DEAKILRRFN
YAHPVFNEQS LQAQARREEI SGQNHTHFAG AYWHNGFHED GVRSALDVCA HFGVTL
|
|---|
| |