Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1235 |
Symbol | |
ID | 4258719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1446990 |
End bp | 1448090 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638121864 |
Product | MerR family transcriptional regulator |
Protein accession | YP_737291 |
Protein GI | 114046741 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAC ATGATTCAAA GGTTGAGGCC GAAAACCTCG AGAGTCGCGA GCTGCTCCCT ATAGGGGAAG TGTCGCTACT GACTGGGGTT AACGCGGTAA CGTTAAGAGC ATGGCAGCGC CGCTTTGGGC TGGTCATCCC TGCGCGTACG CCTAAGGGCC ATAGGTTATA CACTCCTGAA AATATTCAAC AAATCCATGA GATCAATGCA TGGTTAGCCA AGGGCGTCGC CATCAGTAAG GTCAAACCGT TACTGATGAG TTCAGCTCGT GCGACCGAGG ATGACCATAC TACACTGCAA GAGGGGGATT TGTGGCTGGA GCTGATCACA GCTTTAAATA GCGCGCTGTT TGAACTGGAT CAACCAAAGC TGCACCAAAT TCTTGATGAA GCCCTTGGCT TATATCCCTT TCAATTAGTG AAACAAAAAT TGTTGCTGGC TTGGATGGCG CAGTTACCTG CTTTGCTTGA GCCTCGTTTA GATGCCGAGC TGTTGCTTGC ATGGCTAGAA AGCGAGTTAG CCAGTCGCAT CGGAGGGCGC GCCAGTTTTG CCGGGCAGGC CAGTTTGGCG CAAATCGGTG TCGTGTGTTT GCCATCTATC CAAGGGCAAA AAACGGCCGA GCAGCACGCG AGTCATTCGA ACATGACTCA CTCTAGCGTA AGCAACTCAA GCACAAGCAA CTCAAGCATA AGTAGCTCTA GTATAAATAG CTCTAGTATG ACTAATCGCT TGTATAGCTT CGTTTTGCGC TTAGAACTTG CCGAGTTAAG AGTGTCAGTC ATTGATCTTG GTGTACTAGA CACCACAAGC CTTGGGCTTA TCAATAATCG GCTCAAGGTG GACGCTCTCT TGCTAGTGCC TGAGGCGAAT CATCCGCCAT CGAAAATCTT CGAGCTGCAA AGCTTGCTCG AGCAAATGCC ACTTTCCTGT TATCTCATCG GCCCCTTTGC ACCGACTCTC ACGGCCTTAT CGGCGTTTAT GGCGCCAGAC TTGGCTGAAT GGGTTAACCA AGTTTCGGCG GCAAAAGAGC AACAGAAGAA AGAGCTACGC AAGCAGAAAA ACGCGGCCGA AGCGGAGCAA GGAGGGCAAG CCGATGAGTG A
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Protein sequence | MKQHDSKVEA ENLESRELLP IGEVSLLTGV NAVTLRAWQR RFGLVIPART PKGHRLYTPE NIQQIHEINA WLAKGVAISK VKPLLMSSAR ATEDDHTTLQ EGDLWLELIT ALNSALFELD QPKLHQILDE ALGLYPFQLV KQKLLLAWMA QLPALLEPRL DAELLLAWLE SELASRIGGR ASFAGQASLA QIGVVCLPSI QGQKTAEQHA SHSNMTHSSV SNSSTSNSSI SSSSINSSSM TNRLYSFVLR LELAELRVSV IDLGVLDTTS LGLINNRLKV DALLLVPEAN HPPSKIFELQ SLLEQMPLSC YLIGPFAPTL TALSAFMAPD LAEWVNQVSA AKEQQKKELR KQKNAAEAEQ GGQADE
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