Gene Shewmr7_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1208 
Symbol 
ID4256458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1412699 
End bp1413373 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content50% 
IMG OID638121837 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_737264 
Protein GI114046714 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0169079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA CCCAACACAG CGCGGTAACC ATTCATTACC GTTTATCAGA TCAAGACGGC 
AGACTTTTAG AAGACTCTTT TGATGCCGAA CCTATGCTCT ATCTGCACGG TGCAGAAAAC
CTGATCCCAG GATTAGAAGC TGCATTAGAA GGTAAAACCA AGGGCGAAAC ACTGGATGTG
ACTATTAGTG CCGAAGAAGC CTACGGTCCT TACCACGATG GTTTGCGTCA AGCTGTGCCA
TTAGAAGCAT TCGGTGATAT CGAAGATATC GTTCCTGGTA TGCGCTTTAT TGCCGAGACA
GAAATGGGTC AACGCCCAGT GCAAGTTGTC GAAGTCAAAG ATGATGTGGT CATCGTTGAT
GGCAACCATC CTTTAGCGGG CCAAGCACTG AGCTTCAACA TTGAAATTAT CGATGTTCGC
GCTGCAACTG CAGAAGAAGT TGCCCATGGC CATATCCATG CCCACGGCGG ATGTGGCAGC
CATGGACACA GCCATGATCA TGACCACGGC GGCGGATGCT GTGGTGGTTC AAGCCAAGAT
GCGGGTGGCT GTTGTGGCGG TTCTGATGAT CATGGTCATG GTCATGGTCA TCATCACCAT
GACCACGATC ATGAAGCGTG CGACACACCA AAAACAGGTT GTGATGGCAA TGGCGGTTGC
GGTTGCCGTG GCTAA
 
Protein sequence
MKITQHSAVT IHYRLSDQDG RLLEDSFDAE PMLYLHGAEN LIPGLEAALE GKTKGETLDV 
TISAEEAYGP YHDGLRQAVP LEAFGDIEDI VPGMRFIAET EMGQRPVQVV EVKDDVVIVD
GNHPLAGQAL SFNIEIIDVR AATAEEVAHG HIHAHGGCGS HGHSHDHDHG GGCCGGSSQD
AGGCCGGSDD HGHGHGHHHH DHDHEACDTP KTGCDGNGGC GCRG