Gene Shewmr7_1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1203 
Symbol 
ID4256453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1409773 
End bp1410129 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content43% 
IMG OID638121832 
Productsigma 54 modulation protein / SSU ribosomal protein S30P 
Protein accessionYP_737259 
Protein GI114046709 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000410866 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAGA TTACGAGCAA ACAACTAGAA GTCACTGCCC CAATCCGTGA ACGCATTGAA 
AGCCGTTTTG ACAAACTTTC TAGGCACGAT GTGCAGTTGA TTAATCCCCA TGTCATCATC
ACAGAGGAGA AACCTGGTTT CAAAATTGAA GCATCGGTTG GTATCCCAAA TGGAGAACTT
TTTGCTCAAG CAAAACACGA CAATCTTTAT GCAGCCATTA CGGCCATGGG TCAAAAATTA
GAGAAACAAC TCAATCGATT AACCCATAAA CCTGAAGCAC AACGTTTCGC ATCGATTGCT
CATCCCGAAG ACGCTGTTAA TGTCGAGGAT GATTACGAAG AGGAAGATGC AGCTTAA
 
Protein sequence
MLKITSKQLE VTAPIRERIE SRFDKLSRHD VQLINPHVII TEEKPGFKIE ASVGIPNGEL 
FAQAKHDNLY AAITAMGQKL EKQLNRLTHK PEAQRFASIA HPEDAVNVED DYEEEDAA