| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1201 |
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| Symbol | valS |
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| ID | 4256451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1405261 |
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| End bp | 1408137 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638121830 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_737257 |
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| Protein GI | 114046707 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.418789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAA CATACGATCC TCAGTCCATT GAGCAGACTC TTTACCAAAA CTGGGAAGAG
CAAGGTTACT TTAAGCCCCA CGGCGATGCC TCACAGGGCA ACTATTGCAT CATGATCCCG
CCACCTAACG TGACGGGCAG TCTGCACATG GGCCACGCTT TCCAAGATAC CATCATGGAT
ACTCTGATCC GCTACCAACG TATGAAGGGT AAAAACACCC TGTGGCAAGT CGGTACTGAC
CATGCGGGTA TTGCGACTCA AATGCTGGTT GAGCGTAAGC TTGAAGCCGA AGAAGGCAAG
AGCCGCCATG ACCTTGGCCG CGATGCTTTT ATGGAAAAAG TATGGGAATG GAAAGCGCAA
TCTGGCGGCA CCATCACTAA GCAGCTGCGT CGTATGGGCG CCTCAGTGGA TTGGGACCGT
GAGCGCTTTA CCATGGACGA AGGCTTGTCT AAAGCCGTTC AAGAAGTGTT TGTCCGCCTC
TATGAAGATG ATTTGATTTA CCGTGGTAAA CGTTTAGTAA ATTGGGATCC TAAACTACAT
ACCGCGATTT CTGATCTCGA AGTGGAAAAC AAAGAAAAGC AAGGCCACAT GTGGCACCTA
CGTTATCCAT TAGCCGATGG CGAGCTAACT GCCGACGGTA AAGATTACCT CGAAGTCGCC
ACCACGCGTC CAGAAACTAT GCTGGGCGAT AGCGCTGTTG CAGTTCATCC AGACGATGAG
CGTTATCAAG CGCTGATCGG CAAATTTATT CTGCTGCCTA TCGTTAATCG TCGCATCCCT
ATCGTTGCCG ATGACTATGT AGACATGGAG TTTGGCACAG GCTGTGTGAA GATCACCCCA
GCCCACGACT TTAACGACTA TGAAGTCGGT AAACGTCACA AGCTTCCTAT GTTCAACGTG
TTGACCTTAG ATGCGGCCAT TCGCGCTTCC GCCGAAGTCG TTAATACCGA TGGTACAATC
AACACTAGCT TAGATGGCAG CCTACCAGAG CGTTTCGCAG GCCTTGATCG TTTCAAAGCC
CGTGATGCTA TCGTGGCCGA ATTTGAAACC TTAGGTCTGC TCGAAAAAAT CGCGCCACAC
GGCCTAAAAG TACCCTACGG TGACCGCTCT GGTGTAGTAA TCGAACCAAT GCTGACCGAC
CAATGGTACG TCGCAGTTGC ACCTATGGCG AAAACCGCTA TTGAAGCCGT TGAAAATGGC
GACATTAAGT TTGTGCCGCA GCAATACGAA AACATGTACT TCTCTTGGAT GCGCGACATT
CAAGATTGGT GTATCTCTCG CCAATTATGG TGGGGTCACC GCATCCCCGC TTGGTACGAT
GCGAACGGTA AGGTGTATGT TGGCCGTAAC GAAGCTGAAG TGCGTGCTAA GCACAATATC
GATGATGCAA TCGCCCTGCG CCAAGATGAA GACGTACTGG ATACTTGGTT CAGCTCAGCC
CTGTGGACTT TCTCGACTTT AGGCTGGCCT GACAATGTTG AAGATTTAAA AACCTTCCAC
CCGACCGACG TGTTGGTCAC GGGTTTTGAC ATCATCTTCT TCTGGGTTGC CCGTATGATC
ATGATGACCA TGCACTTCAT CAAAGATGAA GACGGTAAGC CACAGGTTCC ATTTAAAACC
GTTTATGTGA CTGGCCTTAT CCGCGATGAA GCGGGTAACA AGATGTCAAA ATCTAAGGGC
AACGTACTTG ACCCATTGGA TATGATTGAC GGTATCGATC TAGAAGCCCT AGTTGAAAAA
CGCACCGGCA ACATGATGCA GCCTCAGCTC GCTGCCAAGA TTGAAAAGAG CACCCGTAAA
GAATTTGAAA ATGGCATCGA AGCCCACGGT ACCGATGCCC TGCGCTTTAC CCTAGCGGCA
ATGGCCTCAA CTGGCCGTGA TATCAACTGG GACATGAAGC GTTTAGACGG TTACCGCAGT
TTCTGTAACA AGCTTTGGAA CGCATCACGT TACGTGCTGA TGAATACCGA AGGCCAAGAT
TGCGGCCCGA ACTCACCGGA TTACCAAGGC GGTGAAATGG AACTGTCATT GGCGGATCGC
TGGATTATCG GTTTATTCAA CCAAACCGTA AAAACCTACG ACGATCACAT GGCAAACTAC
CGTTTCGACC TTGCGGCGAA CACGCTGTAC GAGTTTACTT GGAACCAGTT CTGCGATTGG
TATTTAGAGT TAACTAAACC AGTACTGCAA AACGGCAATG AAGCGCAAAT GCGTGGCACC
CGCCATACGC TGGTCAATGT GTTAGAAGCG ATGCAACGCT TGATGCACCC AATGATGCCA
TACATCACTG AAACCATCTG GCAACGCGTT AAACCGCTGA CTGGCGCTCA AGGCGACACC
ATCATGCTGG CACCATTCCC AAGCTATGAT GCCGCCCAAG TAGATGCGAC CGCGATGGCC
GATCTCGAGT GGGTTAAGCA AGTTATTGTT GCAGTGCGTA ATATCCGTGC CGAGCTCAAT
ATTGCGCCTT CTAAGCCATT AAATGCCCTA CTACGTGGCG TGAGTGCCCA AGATCAAGCC
CGTGTTGAAG CTAACCAAGC CTTCTTCACA ACGCTTGCGC GCTTAGAGAG CATGACGATT
CTTGGCGAAG GTGAAACGGC GCCTATGTCG ACCACAGGTC TGATCGGCGA AATGGAATTA
TTAATTCCGA TGGCAGGTCT GGTGGATGTC GCGGCCGAAA TGGCTCGCAT CGACAAGCAG
CTTGAAAAGC TGACTCAAGA GATTGCCCGT ATCGAAGGTA AGTTATCGAA TGAAGGCTTC
GTTGCGAAAG CACCGCCAGC CGTCATTGAT AAAGAGCGCG CTAAGATGGC CGATCTGAGC
CGTGATATGG ACAAACTAAA AGAGCAAAAA GCCGAGTTTG CTAAGTTAGA AGCCTAA
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| Protein sequence | MEKTYDPQSI EQTLYQNWEE QGYFKPHGDA SQGNYCIMIP PPNVTGSLHM GHAFQDTIMD
TLIRYQRMKG KNTLWQVGTD HAGIATQMLV ERKLEAEEGK SRHDLGRDAF MEKVWEWKAQ
SGGTITKQLR RMGASVDWDR ERFTMDEGLS KAVQEVFVRL YEDDLIYRGK RLVNWDPKLH
TAISDLEVEN KEKQGHMWHL RYPLADGELT ADGKDYLEVA TTRPETMLGD SAVAVHPDDE
RYQALIGKFI LLPIVNRRIP IVADDYVDME FGTGCVKITP AHDFNDYEVG KRHKLPMFNV
LTLDAAIRAS AEVVNTDGTI NTSLDGSLPE RFAGLDRFKA RDAIVAEFET LGLLEKIAPH
GLKVPYGDRS GVVIEPMLTD QWYVAVAPMA KTAIEAVENG DIKFVPQQYE NMYFSWMRDI
QDWCISRQLW WGHRIPAWYD ANGKVYVGRN EAEVRAKHNI DDAIALRQDE DVLDTWFSSA
LWTFSTLGWP DNVEDLKTFH PTDVLVTGFD IIFFWVARMI MMTMHFIKDE DGKPQVPFKT
VYVTGLIRDE AGNKMSKSKG NVLDPLDMID GIDLEALVEK RTGNMMQPQL AAKIEKSTRK
EFENGIEAHG TDALRFTLAA MASTGRDINW DMKRLDGYRS FCNKLWNASR YVLMNTEGQD
CGPNSPDYQG GEMELSLADR WIIGLFNQTV KTYDDHMANY RFDLAANTLY EFTWNQFCDW
YLELTKPVLQ NGNEAQMRGT RHTLVNVLEA MQRLMHPMMP YITETIWQRV KPLTGAQGDT
IMLAPFPSYD AAQVDATAMA DLEWVKQVIV AVRNIRAELN IAPSKPLNAL LRGVSAQDQA
RVEANQAFFT TLARLESMTI LGEGETAPMS TTGLIGEMEL LIPMAGLVDV AAEMARIDKQ
LEKLTQEIAR IEGKLSNEGF VAKAPPAVID KERAKMADLS RDMDKLKEQK AEFAKLEA
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