| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1198 |
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| Symbol | alaS |
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| ID | 4256448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1399445 |
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| End bp | 1402069 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638121819 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_737254 |
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| Protein GI | 114046704 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.400961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCAAA CGACAGCAGC GCTTAGAAGT GCTTTCCTCG AATTTTTCCG CAGCAATGGT
CACCAAGTTG TGGATAGTAG TTCTCTTGTA CCAGGCAACG ATCCCACGCT TTTATTCACC
AACGCCGGTA TGAACCAGTT CAAGGACGTG TTTCTTGGCA TGGACAAACG TAGCTATACA
CGTGCGACCA CTGCCCAACG CTGCGTCCGT GCGGGTGGTA AACACAACGA TTTAGATAAC
GTTGGTTACA CCGCGCGTCA CCATACTTTC TTCGAAATGC TGGGCAACTT CAGCTTTGGT
GATTATTTCA AAGAAGATGC GATTCGTTTT GGTTGGACAT TCCTGACTGA AGTCTTGAAG
CTACCAAAGG AACGTCTGTG TGTAACTGTT TACCAAACAG ACGATGAAGC CTTTGAAATT
TGGAATAAAA AGATTGGTGT TGCTGCCGAA AACATCATTC GCATCGGCGA TAACAAGGGC
GCGCCATACG CTTCAGATAA CTTCTGGCAA ATGGGTGACA CTGGTCCTTG TGGTCCTTGT
ACCGAAATTT TCTACGATCA CGGCGATCAT ATCTGGGGCG GACGTCCTGG TAGCCCAGAA
GAAGATGGCG ACCGTTTCAT CGAAATCTGG AACATCGTAT TCATGCAATA CAATCGCCAA
GCCTCTGGTG AAATGTTGCC GCTGCCAAAA CCTTCAGTCG ATACTGGTAT GGGGATTGAG
CGTATCGCTG CGATTATGCA GGGCGTTCAT TCAAACTACG AAATCGATAT TTTCCGCGCC
TTGATTGCGA AAGCAGCCGA AATCATCGGC GTGACTGACT TATCTAACAA GTCACTGCGC
GTTATTGCCG ACCATATCCG TTCATGCGCC TTCTTAGTTG CCGATGGTGT AATGCCATCG
AACGAAGGTC GTGGCTATGT ACTGCGTCGT ATTATTCGCC GCGCCGTGCG TCATGGTAAC
AAGTTAGGGG CAACTGAAGC CTTCTTCTAC AAGTTAGTTC CGACGCTAAT CGAAGTGATG
GGCGATGCCG CTAAAGGTCT TGCTGATACT CAAGTGATTG TTGAAAAAGC CCTTAAGGCG
GAAGAAGAAC AGTTTGCCCG TACGCTTGAG CGTGGTTTAG GCATTCTAGA TAGTGCGTTA
AACGAATTGC AGGGCGATAC CTTAGACGGT GAAACTGTCT TTAAACTTTA CGATACCTAT
GGCTTCCCAG TGGATTTAAC CGCCGACGTA TGCCGTGAGC GCAACATTAT CGTCGATGAA
GCGGGCTTCG AAGCGGCGAT GGCTGAACAA CGTAGCCGCG CTCAAGCCGC GGGTAACTTC
GGCGCCGATT ACAACGCTGC ACTGAAAATT GATGCTGAAA CCGCATTCTG TGGTTACTCA
GAACTCACAG GCAATGCCAA AGTCACTGCA CTTTACCTAA ACGGTGAGTC AGTTCCTGCA
ATCAATGCGG GTGATGATGC CGTAGTCGTG CTCGACGTGA CGCCATTCTA CGCCGAATCG
GGCGGCCAAG TCGGCGACAA GGGCGTATTA GTGGCTCAAG GTATCGAGTT CGCTGTTAGC
GATACGCAAA AGTTTGGTCA AGCCTCAGGC CACAAAGGGA CGTTAACGGC TGGCAGCCTA
AGCGTTGGCC AAGTACTTGA GGCAAAAGTG GATAAGAAAC TGCGTCACCG CACCCAGTTA
AACCACTCAG TGACTCACTT ATTACATGCT GCGCTGCGTC AAGTGTTAGG TACTCACGTT
ACTCAAAAAG GTTCACTAGT TGATCCTGAG CGTTTACGTT TCGACTTCTC TCATTTCGAA
GCGGTCAAAC CTGCTGAATT GAAACAGGTT GAAGAGTTAG TCAACACCCA AATTCGTCGT
AACCATGAGC TGAAAGTCGC TGAAATGGCG ATTGATGAAG CCAAAGAAAA AGGCGCTATG
GCGCTCTTTG GTGAGAAGTA CGATGCGCAA GTGCGTGTCG TCACTATGGG CGATTTCTCT
ATCGAACTGT GTGGTGGTAC TCACGTTGGT CGTACCGGTG ACATTGGTCT GTTCAAAATT
ACCTCTGAAG GCGGTATCGC TGCGGGCGTT CGCCGTATCG AAGCGGTAAC CGGTGCGGCA
GCGATGGCCT ATGTGGCACA GCAACAAGCG CAACTTGAAG AAGCAGCTGC TCTGCTTAAA
GGCGATACTC AATCTGTTGT GGCTAAGCTG AAAGTGCAAC TGGATAAAAT GAAGCAACTT
GAAAAAGACA TGCAGCAACT AAAAGATAAG TTAGCTGCGG CCGCGAGTGC GGATTTAGCC
GGTGATGCCG TTGTGGTTAA TGGCGTAAAT GTGCTGATTA AGAAGCTTGA AGGCGTTGAA
GCAGGTGCAC TGCGTGGACT GCAAGATGAG TTGAAGCAAA AGCTGAAATC CGCCGTTATC
CTGCTCGGTG TGGCTCAAGA AGGTAAAGTG AACCTTATCG CGGGTGTGAG CAACGACTTA
GTCGGTAAAG TTAAAGCCGG TGAACTGGTT GCTATGGTTG CTGCGCAGGT GGGTGGTAAA
GGCGGTGGTC GCCCTGATAT GGCTCAAGCG GGTGGTAGCC AACCAGAAAA TCTGGATGCG
GCACTGTCTC AAGTATTACC TTGGATTACT GAGCGTTTAG CTTAA
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| Protein sequence | MYQTTAALRS AFLEFFRSNG HQVVDSSSLV PGNDPTLLFT NAGMNQFKDV FLGMDKRSYT
RATTAQRCVR AGGKHNDLDN VGYTARHHTF FEMLGNFSFG DYFKEDAIRF GWTFLTEVLK
LPKERLCVTV YQTDDEAFEI WNKKIGVAAE NIIRIGDNKG APYASDNFWQ MGDTGPCGPC
TEIFYDHGDH IWGGRPGSPE EDGDRFIEIW NIVFMQYNRQ ASGEMLPLPK PSVDTGMGIE
RIAAIMQGVH SNYEIDIFRA LIAKAAEIIG VTDLSNKSLR VIADHIRSCA FLVADGVMPS
NEGRGYVLRR IIRRAVRHGN KLGATEAFFY KLVPTLIEVM GDAAKGLADT QVIVEKALKA
EEEQFARTLE RGLGILDSAL NELQGDTLDG ETVFKLYDTY GFPVDLTADV CRERNIIVDE
AGFEAAMAEQ RSRAQAAGNF GADYNAALKI DAETAFCGYS ELTGNAKVTA LYLNGESVPA
INAGDDAVVV LDVTPFYAES GGQVGDKGVL VAQGIEFAVS DTQKFGQASG HKGTLTAGSL
SVGQVLEAKV DKKLRHRTQL NHSVTHLLHA ALRQVLGTHV TQKGSLVDPE RLRFDFSHFE
AVKPAELKQV EELVNTQIRR NHELKVAEMA IDEAKEKGAM ALFGEKYDAQ VRVVTMGDFS
IELCGGTHVG RTGDIGLFKI TSEGGIAAGV RRIEAVTGAA AMAYVAQQQA QLEEAAALLK
GDTQSVVAKL KVQLDKMKQL EKDMQQLKDK LAAAASADLA GDAVVVNGVN VLIKKLEGVE
AGALRGLQDE LKQKLKSAVI LLGVAQEGKV NLIAGVSNDL VGKVKAGELV AMVAAQVGGK
GGGRPDMAQA GGSQPENLDA ALSQVLPWIT ERLA
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