Gene Shewmr7_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1193 
Symbol 
ID4258136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1392559 
End bp1393455 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content42% 
IMG OID638121814 
Productpeptidase M23B 
Protein accessionYP_737249 
Protein GI114046699 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.8562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGAATG CGGGTTTACT CTTAAACCTC AGTTTAGTGT TGTTGCTTGC AGGCTGTAGC 
TTTCAGGCGA GTCGCCCCGC ACCTGTCGAA AGTCTTTCCC ACAATTATTC CAAACATAAT
AAAGGCCACA TTAAATCTAA TTCATATAAA GTTAAGAAAG GGGACACCCT GTACTCGATT
TCTTGGGCCG CGGGTAAAGA TTTCGCCGAA ATTGCTAAAA TTAATCAATT AGATAAATCG
TACACCATCT ACCCTGGACA GATTTTATAT TTAACGAATG ACGATAGAAA AAATGCCAAA
GGTTCTACAA CTTTAGGTGG AAGTAATTCG GTATCTAAAG GGCGGAATCA AGATAATTTT
TCGGAAAAAC AATCAGCTAA CAGCAATTCC TCCGCGAAAA ACTTGTCAAG TGAACAGCAG
AAAAAAACAC TTGATCAGAA AGCGAAGCCT GCGTATTCTG CAACAAGTTC CCAACAAAAT
ATTAACCCTT CGATCGTCGC CCCTACCTCA ACACTGCCAG ACAGTGTCAG TCAGTGGCAA
TGGCCAGTAA AAGGTAAATT GATTGGGACA TACTCTGCCA ATGAGCAGGG AAATAAAGGA
ATTAAGATCG CAGGAAAACG CGGAGATATC ATCAAAGCCG CTGCAGATGG GCGGGTGGTA
TACGCAGGTA GTGCTCTTAG GGGTTATGGT AATTTAGTGA TTATTAAACA TAGTGACGAT
TACCTTAGTG CCTATGCTCA TGCAGATCAG ATCTTAGTCG AAGAAAAGCA ACATGTCCTC
GCTGGACAGA CAGTTGCAAA AATGGGCAGT ACAGGTACGA ACCAGGTAAT GCTTCGCTTT
GAGATCCGTT ACCACGGTCA GTCTGTTAAC CCACTTAATT ATTTACCTAA GCAATGA
 
Protein sequence
MLNAGLLLNL SLVLLLAGCS FQASRPAPVE SLSHNYSKHN KGHIKSNSYK VKKGDTLYSI 
SWAAGKDFAE IAKINQLDKS YTIYPGQILY LTNDDRKNAK GSTTLGGSNS VSKGRNQDNF
SEKQSANSNS SAKNLSSEQQ KKTLDQKAKP AYSATSSQQN INPSIVAPTS TLPDSVSQWQ
WPVKGKLIGT YSANEQGNKG IKIAGKRGDI IKAAADGRVV YAGSALRGYG NLVIIKHSDD
YLSAYAHADQ ILVEEKQHVL AGQTVAKMGS TGTNQVMLRF EIRYHGQSVN PLNYLPKQ