| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1175 |
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| Symbol | |
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| ID | 4258293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1365228 |
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| End bp | 1368035 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638121796 |
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| Product | hybrid sensory histidine kinase BarA |
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| Protein accession | YP_737231 |
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| Protein GI | 114046681 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.846523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0419846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCTG TCAACAACAT GACCAAATAC AGCTTACGTT CCTGGGTTCT GGTGCTAGCG
CTTGCGCCGA CGATCTTAGT CGGTATTCTG CTGGGCAGCT ACTTTACCAT AAATCGCTTC
TATGAACTCG AAGATACGCT GATTGAACAG GGCAGCAATA TTATCGAGCC TTTAGCGATT
GCCAGTGAAG TGGGACTCGT GGCCAATGAC AGAGAGGCGA CCAAACGACT CCTTGCCGCC
GCGCAACTCA ATAAGTCCAC ACTCGTCAAA TCCATCGCCA TTTTTGACAT TCAAAATCAA
CTCTTTGTCA CATCGCATTA CCACAAAGAC TTCGAAATCA TGCGCTATAA AGAGGCGCTG
AGTAATCTGC ACAAAACCGA AATCGAGCAT GTAGGCGATA GCCTTATCCT TCGAACGCCG
ATTTTTGCTA CCGCCCCTCC GGCGCCGGGC GCGACCATCA ATTTTGATAT TCAAACCGAT
AACGGCGAGT TGCTCGGCTA TATTTCGGTG ATTATCAATA AAGAACGCGC GCTGCTCGAA
CAGCACAGGG CCGCCGTGGC CGCCTTTATT ATCGTCTTGA TTGGGGTGCA ATTAAACCTG
TTGTTTACCT TTCGTCTGGT TAAAAACGTC ACCCAGCCGA TTACCGAAAT GGTGCGAGTG
GTGGCCAAAA TTCGCGAGGG TAAACTCGAT GCGAGGCTCG AGGGTAATCT TATCGGTGAA
CTGGATTTGC TTAAACGCGG TATTAACGCC ATGGCGGGTT CGCTATCGGA ATATCACGAT
GAGATGCAGC AAAATATCGA TCAGGCCACC TCGGATCTGC GGGAAACCTT AGAGCAGATT
GAGATCCAAA ACGTCGAACT CGACTTAGCC AAAAAACGCG CGCTGGAGGC CAGCCGCATT
AAGTCGGAGT TCTTGGCGAA CATGTCCCAC GAACTGCGCA CGCCATTAAA CGGCGTGATA
GGCTTTGCCC GTCAGCTCGT TAAAACCCCG TTGCACTCGA GCCAAGTCGA TTACATTAAT
ACCATCGAGC GCAGCGCGAC TAACCTACTG GCGATTATCA ACGATATTCT CGACTTCTCG
AAACTCGAAG CCGGTAAAAT GGTGTTAGAA AAAATGCCAT TCGGCTTAAG GGAAACCTTA
GGTGAGACGA TTACCTTAAT CTCGGGCAGC GCGCAGGCGA AAGGGCTGGA ATTGGTCGTC
GATATTGCGC CAAACGTCCC CGACAACGTT AACGGCGATG CCATGCGCGT TTGCCAAATT
ATCAATAACT TAGTAGGCAA TGCCATCAAG TTTACCGATT CAGGCAGCGT GTTAGTCAAA
TTAGAATTAC AAAACCAGAC CGACGAGCAA GTGGTACTGC GCTGTGATGT GATTGATACC
GGGATTGGGA TTGACGACAG CCAGCAGGAC TTCCTCTTTC AAGCCTTTGG TCAAGCGGAT
TCCTCAATTT CTCGCCGCTT TGGCGGTACA GGGCTGGGGC TCGTTATCAC TAAGCGCCTA
GTCAATCAAA TGGGCGGCCA AATTGGCTTT ACCTCGGCGG TGGATAAGGG GTCTAACTTC
TGGTTCACTC TGCCATTAGG GCTCGGCCAA TTCCAAATTG GTGACTCACT GCCCTTTGAA
AAACTTAAAG ATAAAACCGT GCTGTTTTAT GAGCCCAGAG TGCTCACCCA TTCGGTGATT
AGTCGTCAAC TAAAACAGTG GGATACCAAA GTTACTCACC ATCAACACAT TCCGAGTTTA
CAGACGACGC TCTCGACCAC TGATCATCAG TTCGATTATG TGCTATTAAG CTGCCATGGA
TTTAGCAATC CCAATCAATT AGTCAGCACC TTAAACCAAG CCAAGACCAA GACGGATTGC
TTAATCGTGC TGTTCGATTG CCAAGAGCAG GAAGTGCTAA GCCAATTTAT TCGGCCCAAT
GCCGATGTGG TGTTGTCACT GCCGGTGAGC GAGCACCAAC TGGCGCGCAA TATGCTTTAT
CCGCCAATGG AATATGACAT TTCACCACCT GCCAGCATCA CAGTGCCCGC CGCTCGCCAA
TCACTGACCG TATTGGCGGT GGACGATAAT TTTGCCAATT TAAAGCTGAT TGATACCCTG
CTTAACGAGT TAGTGACGAC CGTCATCGCC GTTAACAGCG GTGAAGAAGC CGTCAAACAA
GCCAAGAGCC GCACCTTTGA CCTTATCTTT ATGGATATTC AGATGCCGGG TACCGACGGC
ATCAGCGCCA CTAAGCAAAT CCGCCAAGGG TCGATGAACC GTAACACGCC GATTATTGCC
GTGACCGCCC ACGCGATTGC CGAGGAACGT GAACTGATTT TAGGCAGCGG TATGGATGGG
TACTTGCCTA AACCCATAGA TGAAGCCGCC CTCAAAGCGG AAATAAACCG CTGGATCACT
CGGCCTAAGT TCACCCATTT CGATTTACAC ACTCTCAACT GGGATCTTTG CTTAACCCAA
GCAAACCATA AGTCAGATTT AGCCTTAGAC ATGCTGCGCA TGTTATTGGA TTCGCTGCCT
CAAACCGTCT CGGCCATCGA GACGGCGCTG AGCCAAGATG ACCAAGCGAC TATGCTCAGC
ACAATCCATA AGCTCCATGG TGCTAGTTGC TATTGTGGGG TACCAACGAC ACAGCGATTA
TGCCAAGAGA TTGAATCGGC ATTGAAACGT GATGCCCGTG TCGAAGATCT CGAACCGGAA
ATACTAGAGT TACTTGATGA GCTAACTAAG GTAGAATCGG CGGCAAAACA AGTGCTATCA
CAGCTATCAG CGGAAATAAC AGATGACCAA AAAAACGGGC TTCTTTAA
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| Protein sequence | MNPVNNMTKY SLRSWVLVLA LAPTILVGIL LGSYFTINRF YELEDTLIEQ GSNIIEPLAI
ASEVGLVAND REATKRLLAA AQLNKSTLVK SIAIFDIQNQ LFVTSHYHKD FEIMRYKEAL
SNLHKTEIEH VGDSLILRTP IFATAPPAPG ATINFDIQTD NGELLGYISV IINKERALLE
QHRAAVAAFI IVLIGVQLNL LFTFRLVKNV TQPITEMVRV VAKIREGKLD ARLEGNLIGE
LDLLKRGINA MAGSLSEYHD EMQQNIDQAT SDLRETLEQI EIQNVELDLA KKRALEASRI
KSEFLANMSH ELRTPLNGVI GFARQLVKTP LHSSQVDYIN TIERSATNLL AIINDILDFS
KLEAGKMVLE KMPFGLRETL GETITLISGS AQAKGLELVV DIAPNVPDNV NGDAMRVCQI
INNLVGNAIK FTDSGSVLVK LELQNQTDEQ VVLRCDVIDT GIGIDDSQQD FLFQAFGQAD
SSISRRFGGT GLGLVITKRL VNQMGGQIGF TSAVDKGSNF WFTLPLGLGQ FQIGDSLPFE
KLKDKTVLFY EPRVLTHSVI SRQLKQWDTK VTHHQHIPSL QTTLSTTDHQ FDYVLLSCHG
FSNPNQLVST LNQAKTKTDC LIVLFDCQEQ EVLSQFIRPN ADVVLSLPVS EHQLARNMLY
PPMEYDISPP ASITVPAARQ SLTVLAVDDN FANLKLIDTL LNELVTTVIA VNSGEEAVKQ
AKSRTFDLIF MDIQMPGTDG ISATKQIRQG SMNRNTPIIA VTAHAIAEER ELILGSGMDG
YLPKPIDEAA LKAEINRWIT RPKFTHFDLH TLNWDLCLTQ ANHKSDLALD MLRMLLDSLP
QTVSAIETAL SQDDQATMLS TIHKLHGASC YCGVPTTQRL CQEIESALKR DARVEDLEPE
ILELLDELTK VESAAKQVLS QLSAEITDDQ KNGLL
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