Gene Shewmr7_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1168 
Symbol 
ID4258286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1358555 
End bp1359049 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content50% 
IMG OID638121789 
Productphosphatidylglycerophosphatase 
Protein accessionYP_737224 
Protein GI114046674 
COG category[I] Lipid transport and metabolism 
COG ID[COG1267] Phosphatidylglycerophosphatase A and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.092913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.125694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTGT TATCCCAAGA TCAGGCGCTG TCGCGCCTGT CTCTTAAAAA TCCGATCCAT 
TTTTTAGCAC TAGGCTTTGG CAGCGGTTTA GCAGCTAAGG CGCCCGGCAC TTTTGGCACC
TTGGCGGCTG TGCCGCTCTA TTTGTTATTG GCCCAATTGC CCTTGAGTTG GTACTTAGCT
GTGACCTTAA TATGCGTACT CGCGGGGATT TATATCTGCG ATAAGGCGGC TAAAGACATG
GGCGTGCATG ACCATGGCGC GATTGTATGG GATGAGGTCG TAGGCCTGTT AATCACTATG
ATTGCGGCGC CGGCCGGAGT GATCTGGTTA GTCGTTGGTT TTGTGCTGTT TCGTTTCTTT
GACATCATCA AGCCTTGGCC CATTCGTTGG CTGGATGCCA AGGTCGAAGG TGGCTTTGGC
ATTATGATCG ACGATGTATT AGCGGGAATT TTTGCGCTTA TTGGTGTGCA AGTTCTTGCG
GCTTTTATGC TCTAA
 
Protein sequence
MKLLSQDQAL SRLSLKNPIH FLALGFGSGL AAKAPGTFGT LAAVPLYLLL AQLPLSWYLA 
VTLICVLAGI YICDKAAKDM GVHDHGAIVW DEVVGLLITM IAAPAGVIWL VVGFVLFRFF
DIIKPWPIRW LDAKVEGGFG IMIDDVLAGI FALIGVQVLA AFML