| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1163 |
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| Symbol | |
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| ID | 4258281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1354657 |
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| End bp | 1355313 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638121784 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_737219 |
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| Protein GI | 114046669 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.166605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.121939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTACTG GGATTATTGA GGCCGTTGGC ACGCTGCGAA AGCTTGAACG TAAAGGCGAT
GATATTCGTT TGACGGTCGC CAGTGGCAAA CTGGATTTAA GTGATGTGCG TTTAGGCGAC
AGTATCGCCA CCAATGGTGT GTGTTTGACT GTGGTTCAGC AATTAGCCGA TGGCTATGTG
GCGGATGTGT CGGCTGAAAC TGTCAGTCTC ACAGGCTTTG CTAACTATAA AGTCGGCACT
AAGGTTAATC TTGAAAAAGC CGTTACCCCG ACAACTCGCC TCGGCGGACA CATGGTCAGC
GGCCATGTGG ATGGTATTGC CACCGTAGAG CAGCGTCTTG CTCGTGGTCA AGCAATCGAA
TTTTGGTTAG CGGCGCCTGC TGAGCTGGCT CGGTATATTG CTCATAAAGG TTCTATCACC
ATCGATGGCG TGAGCCTGAC GGTAAACGAA GTCGATGGAC ACCGTTTCCG ATTAACCATA
GTGCCCCATA CCGCGGGTGA AACCACGTTG GTAGATTTGA AAGCCGGCGA TAAGGTAAAT
ATTGAAGTGG ATTTAATCGC CCGCTATTTA GAGCGTTTAA TGCGCTTTGA TACTAAAGAA
ACCCAAGGCG GCGGGGTGAC CATGGAAATG TTAGCCCGTG CTGGCTTTGT GCGTTAG
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| Protein sequence | MFTGIIEAVG TLRKLERKGD DIRLTVASGK LDLSDVRLGD SIATNGVCLT VVQQLADGYV
ADVSAETVSL TGFANYKVGT KVNLEKAVTP TTRLGGHMVS GHVDGIATVE QRLARGQAIE
FWLAAPAELA RYIAHKGSIT IDGVSLTVNE VDGHRFRLTI VPHTAGETTL VDLKAGDKVN
IEVDLIARYL ERLMRFDTKE TQGGGVTMEM LARAGFVR
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