| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1162 |
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| Symbol | |
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| ID | 4258280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1353504 |
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| End bp | 1354649 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638121783 |
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| Product | 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase |
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| Protein accession | YP_737218 |
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| Protein GI | 114046668 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.399526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.141715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTGGT CAGAACTTGA TAACCAGATG ATGAGCCGAG CCATACAACT GGCTCGCAAA
GGATTTTATA CCACTCGCCC CAATCCCAGT GTGGGCTGCG TTATCGTAAA AGATAATCAG
ATTGTCGGTG AAGGTTATCA TCAAAAAGCC GGCGAGCCCC ACGCCGAGGT GCATGCACTG
CGCATGGCTG GCGAGCTTGC CCGTGGCGCG ACCGCCTATG TCACCTTAGA ACCTTGCAGC
CATTATGGTC GTACGCCGCC CTGCGCCTTG GCGTTGATCA ACATAGGTGT AAAACGTGTG
GTGGTGGCGG TTGAAGATCC CAATCCGCAG GTCGGTGGTC GCGGTATTCA AATGCTGCGC
GATGCGGGCA TTCAAGTGGA TGTCGGTTTA CATCGCGACG AAGCTTACGC TTTAAATCTT
GGTTTTATGA AGCGCATGGA GTCGGGTCTA CCTTGGGTGA CGGTAAAGCT TGCCGCGAGT
CTCGATGGTA AAACCGCATT ATCCAACGGT GTGTCCAAAT GGATCACAGG CCCCGAAGCT
CGCCGCGATG TGCAGCGCTT ACGTATACGC GCCTGCGCGC TAGTGACAGG GATTGACACT
GTGCTAGCCG ATGACCCTTC GCTCAATGTG CGCTACTCAG AGCTTGGCAG TCTTAACTCA
CTATTGAGTG AGGCGCAAAT TTTACAACCG CTACGGGTGA TTTTAGACAG TCGCTGCCGC
ATGCCGATTA AGGCAGCTTT GCTTGCGATT GAATCGCCGA TTTTATTAGT CTCAACTGAG
CCATACTCGC CAGCCTTTAT GGCGCAGTTG CCGTCCCATG TGACTTGTCT TCAATTACCG
GCGATTGATG GTCGCATCTC GCTGCCCACA CTCTTAAGCT ATTTAGGCAA AAGCTGTAAT
CAGGTGCTTA TCGAAGCGGG CGCGACCTTA GCGGGTGCCT TTATCGGCGC GGGATTAGCC
GATGAGTTAG TACTGTATCA AGCGATGAAA GTCCTTGGCG CACAAGGGCG TAATCTACTC
GAATTACCCG ATTATCAAAT GATGGCCGAT ATTCCGACCC TCAAACTGGT CGATGAGCGT
AAAGTGGGCG CGGATACGCG TTTCACCTTA AGGCTCACGT CCAATCCATC TTTAGCGAAT
AAGTGA
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| Protein sequence | MNWSELDNQM MSRAIQLARK GFYTTRPNPS VGCVIVKDNQ IVGEGYHQKA GEPHAEVHAL
RMAGELARGA TAYVTLEPCS HYGRTPPCAL ALINIGVKRV VVAVEDPNPQ VGGRGIQMLR
DAGIQVDVGL HRDEAYALNL GFMKRMESGL PWVTVKLAAS LDGKTALSNG VSKWITGPEA
RRDVQRLRIR ACALVTGIDT VLADDPSLNV RYSELGSLNS LLSEAQILQP LRVILDSRCR
MPIKAALLAI ESPILLVSTE PYSPAFMAQL PSHVTCLQLP AIDGRISLPT LLSYLGKSCN
QVLIEAGATL AGAFIGAGLA DELVLYQAMK VLGAQGRNLL ELPDYQMMAD IPTLKLVDER
KVGADTRFTL RLTSNPSLAN K
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