Gene Shewmr7_1161 details

Gene Information

• Locus tag: Shewmr7_1161
• Symbol: nrdR
• ID: 4257806
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella sp. MR-7
• Kingdom: Bacteria
• Replicon accession: NC_008322
• Strand: +
• Start bp: 1352962
• End bp: 1353411
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 638121782
• Product: transcriptional regulator NrdR
• Protein accession: YP_737217
• Protein GI: 114046667
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.860678
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 6
• Fosmid unclonability p-value: 0.127116
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCATTGTC CATTTTGCAG CGCGACAGAT ACTAAAGTGA TCGATTCCCG ATTAGTGGCG 
GAAGGCCATC AAGTGCGTCG TCGCCGAGAA TGCACCGAAT GCCACGAAAG ATTTACCACC 
TTCGAAGGCG CCGAATTAGT CATGCCACGG GTGATTAAAC GCGATGGTAC GCGCCAACCC 
TTCGATGAAG AAAAGCTGCA AGCAGGCATG TTACGCGCGG TCGAAAAGCG CCCCGTGTCC 
ATGGATGAAA TCGAGCAGGC CTTAAGTAAA ATCAAGTCAA CGCTGCGGGC TACTGGCGAG 
CGTGAAGTGC CATCCGAGAT GATAGGTAAC TTGATGATGG AACAGTTAAT GAGCCTAGAC 
AAGGTTGCCT ATATTCGTTT TGCCTCGGTT TATCGCGCCT TTGAAGACGT CTCCGAATTT 
GGTGAGGCGA TTGCGAAACT GCAAAAGTAA 

 

Protein sequence

MHCPFCSATD TKVIDSRLVA EGHQVRRRRE CTECHERFTT FEGAELVMPR VIKRDGTRQP 
FDEEKLQAGM LRAVEKRPVS MDEIEQALSK IKSTLRATGE REVPSEMIGN LMMEQLMSLD 
KVAYIRFASV YRAFEDVSEF GEAIAKLQK