Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1160 |
Symbol | glyA |
ID | 4257805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1351512 |
End bp | 1352765 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638121781 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_737216 |
Protein GI | 114046666 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.145933 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAAA AAGATATGAA TATCGCAGAT TATGATCCGG AACTGTTCAA CGCAATTCAG AACGAAACTC TGCGTCAAGA AGAGCATATT GAGCTGATTG CTTCTGAAAA CTACACCAGT CCACGCGTGA TGCAAGCGCA AGGTTCACAA TTAACCAACA AGTACGCCGA AGGTTACCCT GGCAAGCGTT ACTACGGTGG TTGTGAGTAT GTGGACGTAG TTGAAACCTT AGCGATTGAG CGTGCAAAAC AACTGTTTGG TGCGACTTAC GCAAACGTGC AACCTCACTC AGGTTCTCAA GCAAACAGCG CCGTTTACAT GGCATTGTTA AAACCAGGCG ATACCGTTTT AGGTATGAAC CTCGCTCACG GTGGTCACTT GACCCACGGT TCACCTGTAA ACTTCTCCGG TAGACTGTAC AACATCATTC CTTACGGCAT CGACGAATCA GGCAAAATCG ACTATGACGA AATGGAACGT CTGGCGGTTG AACATAAGCC TAAGATGATG ATCGGTGGTT TCTCTGCTTA CTCAGGCATC GTTGACTGGG CAAGAATGCG CGAAATCGCA GACAAAATCG GTGCTTACCT GTTTGTCGAC ATGGCGCACG TTGCGGGTCT TATCGCCGCG GGTGTGTATC CAAACCCAGT GCCACACGCG CACGTTGTGA CCTCTACTAC TCACAAGACC TTAGCTGGTC CTCGTGGCGG TATCATTCTG TCTGCTGCCG ATGATGAAGA GCTATACAAA AAGCTAAACT CAGCGGTATT CCCAGGCGGT CAAGGCGGTC CTTTGATGCA CGTTATCGCG GGTAAAGCGG TCGCCTTCAA AGAAGCTTTA GAGCCAGAGT TCAAAGCTTA CCAACAACAA GTGGTTAAGA ACGCTAAAGC CATGGTTGAA GTGTTCTTAG AGCGCGGTTA CAAGATCGTT TCTGGCGGTA CTGACAACCA CTTAATGCTG GTGGACTTAA TTGGTCGCGA CCTGACGGGT AAAGAAGCCG ATGCCGCTTT AGGTAGCGCG AACATCACAG TAAACAAAAA CTCTGTGCCA AACGATCCAC GTTCTCCATT CGTGACCTCT GGTGTACGTA TTGGTACGCC TGCGATCACT CGCCGTGGCT TTAAAGAAGC TGAAGCGAAA GAGTTAACCG GTTGGATCTG TGACATCCTC GACGATGCCC ACAACCCAGC GGTTATCGAG CGCGTAAAAG GCCAAGTATT GGCACTGTGC GCCCGTTTCC CTGTTTACGG TTAA
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Protein sequence | MLKKDMNIAD YDPELFNAIQ NETLRQEEHI ELIASENYTS PRVMQAQGSQ LTNKYAEGYP GKRYYGGCEY VDVVETLAIE RAKQLFGATY ANVQPHSGSQ ANSAVYMALL KPGDTVLGMN LAHGGHLTHG SPVNFSGRLY NIIPYGIDES GKIDYDEMER LAVEHKPKMM IGGFSAYSGI VDWARMREIA DKIGAYLFVD MAHVAGLIAA GVYPNPVPHA HVVTSTTHKT LAGPRGGIIL SAADDEELYK KLNSAVFPGG QGGPLMHVIA GKAVAFKEAL EPEFKAYQQQ VVKNAKAMVE VFLERGYKIV SGGTDNHLML VDLIGRDLTG KEADAALGSA NITVNKNSVP NDPRSPFVTS GVRIGTPAIT RRGFKEAEAK ELTGWICDIL DDAHNPAVIE RVKGQVLALC ARFPVYG
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