Gene Shewmr7_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1158 
Symbol 
ID4257803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1348570 
End bp1349577 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content50% 
IMG OID638121779 
Producthypothetical protein 
Protein accessionYP_737214 
Protein GI114046664 
COG category[S] Function unknown 
COG ID[COG1808] Predicted membrane protein 
TIGRFAM ID[TIGR00271] uncharacterized hydrophobic domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.826231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.252208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG ATATTAAAGA TCACAAAGAA ATTACCCGCG CGAATATTCG CGTCAATGCC 
CAGCTCGATG TGCCCTTTTT GGCGATGAAC ACCCTAGCGG CCATCATCGC CAGCTACGGA
CTCTTGGCCA ACAGCGCTGC CGTGGTCATT GGTGCCATGA TTGTCGCTAT GTTGTTTTCC
CCCATTTTAG GCTTGGCATT AGGACTGGTC GAAGGGGAAA AGCTGCTAGT TCGCCATGCC
ATTAAAAGTT TAATTGTGGG GAGTATTCTG GTTTATTTCA CCGCCTTTTT AATTGGCTTC
CTGCATTCCG ATATTCCTAT CACGCCGGAG ATCATGGCGA GAACGGCGCC AAACTTTCTC
GATTTAATGG TCGCGTTTGC AGGTGGTGCG GCTGGCGCCT ATGCGACCAT TTCGCCGCGG
TTAAGTACTT CCTTTGTGGG GGTGGCGATT GCTACTGCAT TAGTGCCGCC CCTGTGTGCC
TCGGCGATAT TGCTCGGCCA TGGCAATTTT GAACTCGCCC GAGGCGCCTT CTTACTGACG
TTTACCAACA TAGTCGCCAT CCAATTTGTG TCCTCCGTGG TGCTGTGGTT GAACGGTTTT
CACGGATTTT ATTTTTGGCA AAAAAGCTCG CTGTGGGAGT TGCTGAAACG CAATTTTATT
ACATTGATCT TGCTGGTTAT TTTAGTTATT GCCCTCAGCG TGAATCTGCA TAATGTGGTG
GCAAGGCAAC TGTATGAGAG CAAAGTGACT CGGATTGTGA GTGAGCAGCT ACTCAAATTC
CCCAATATGC GGTTGATTAA AGTCGGCATT GAGGAAGAGG CGAGTCAATG GATTGTGCGT
GTCACCGTTG GCGGAATTAA AAAACCAGAT GCCAGCTTTG TGCGACTACT GGAGAGTGAG
TTGACGCAGA CGGGGCAAGA AAAACCGGCG ACCGTGCGCG TGCGTTACTT TCCGGTCGAT
GTGATTGACC GCGATGGTGA TGTGAAAGCG ATTCAGGAGC AGGATTAG
 
Protein sequence
MSEDIKDHKE ITRANIRVNA QLDVPFLAMN TLAAIIASYG LLANSAAVVI GAMIVAMLFS 
PILGLALGLV EGEKLLVRHA IKSLIVGSIL VYFTAFLIGF LHSDIPITPE IMARTAPNFL
DLMVAFAGGA AGAYATISPR LSTSFVGVAI ATALVPPLCA SAILLGHGNF ELARGAFLLT
FTNIVAIQFV SSVVLWLNGF HGFYFWQKSS LWELLKRNFI TLILLVILVI ALSVNLHNVV
ARQLYESKVT RIVSEQLLKF PNMRLIKVGI EEEASQWIVR VTVGGIKKPD ASFVRLLESE
LTQTGQEKPA TVRVRYFPVD VIDRDGDVKA IQEQD