Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1158 |
Symbol | |
ID | 4257803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1348570 |
End bp | 1349577 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638121779 |
Product | hypothetical protein |
Protein accession | YP_737214 |
Protein GI | 114046664 |
COG category | [S] Function unknown |
COG ID | [COG1808] Predicted membrane protein |
TIGRFAM ID | [TIGR00271] uncharacterized hydrophobic domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.826231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.252208 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAG ATATTAAAGA TCACAAAGAA ATTACCCGCG CGAATATTCG CGTCAATGCC CAGCTCGATG TGCCCTTTTT GGCGATGAAC ACCCTAGCGG CCATCATCGC CAGCTACGGA CTCTTGGCCA ACAGCGCTGC CGTGGTCATT GGTGCCATGA TTGTCGCTAT GTTGTTTTCC CCCATTTTAG GCTTGGCATT AGGACTGGTC GAAGGGGAAA AGCTGCTAGT TCGCCATGCC ATTAAAAGTT TAATTGTGGG GAGTATTCTG GTTTATTTCA CCGCCTTTTT AATTGGCTTC CTGCATTCCG ATATTCCTAT CACGCCGGAG ATCATGGCGA GAACGGCGCC AAACTTTCTC GATTTAATGG TCGCGTTTGC AGGTGGTGCG GCTGGCGCCT ATGCGACCAT TTCGCCGCGG TTAAGTACTT CCTTTGTGGG GGTGGCGATT GCTACTGCAT TAGTGCCGCC CCTGTGTGCC TCGGCGATAT TGCTCGGCCA TGGCAATTTT GAACTCGCCC GAGGCGCCTT CTTACTGACG TTTACCAACA TAGTCGCCAT CCAATTTGTG TCCTCCGTGG TGCTGTGGTT GAACGGTTTT CACGGATTTT ATTTTTGGCA AAAAAGCTCG CTGTGGGAGT TGCTGAAACG CAATTTTATT ACATTGATCT TGCTGGTTAT TTTAGTTATT GCCCTCAGCG TGAATCTGCA TAATGTGGTG GCAAGGCAAC TGTATGAGAG CAAAGTGACT CGGATTGTGA GTGAGCAGCT ACTCAAATTC CCCAATATGC GGTTGATTAA AGTCGGCATT GAGGAAGAGG CGAGTCAATG GATTGTGCGT GTCACCGTTG GCGGAATTAA AAAACCAGAT GCCAGCTTTG TGCGACTACT GGAGAGTGAG TTGACGCAGA CGGGGCAAGA AAAACCGGCG ACCGTGCGCG TGCGTTACTT TCCGGTCGAT GTGATTGACC GCGATGGTGA TGTGAAAGCG ATTCAGGAGC AGGATTAG
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Protein sequence | MSEDIKDHKE ITRANIRVNA QLDVPFLAMN TLAAIIASYG LLANSAAVVI GAMIVAMLFS PILGLALGLV EGEKLLVRHA IKSLIVGSIL VYFTAFLIGF LHSDIPITPE IMARTAPNFL DLMVAFAGGA AGAYATISPR LSTSFVGVAI ATALVPPLCA SAILLGHGNF ELARGAFLLT FTNIVAIQFV SSVVLWLNGF HGFYFWQKSS LWELLKRNFI TLILLVILVI ALSVNLHNVV ARQLYESKVT RIVSEQLLKF PNMRLIKVGI EEEASQWIVR VTVGGIKKPD ASFVRLLESE LTQTGQEKPA TVRVRYFPVD VIDRDGDVKA IQEQD
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