| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1150 |
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| Symbol | |
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| ID | 4257795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1337335 |
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| End bp | 1338456 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638121771 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_737206 |
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| Protein GI | 114046656 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000335121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.257402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCAA TGAAAAAAAC CATAATAGCC ATTGCCTTAG TTGCTGCGGT TGCCGCCGCT
GTGAGTTTTA GTGATGTACT GCAAGCGGCC AAACCCGAAA GCGCGCCCCA TTTAATGCGT
ACAGTACCTG TGGTTACCGG AGAAGTGGTT GAACATCCGC TAACACAATC GATTTCACTG
ATTGGTAAGC TCGCTGCCGA TCGCGCCGTG GTAATCGCGC CGCAAGTCAC AGGCAAAATT
AAGCAAATCG CAGTGACATC AAACCAAGCG GTCAAGAAAG GCCAACTGCT TATTGAGCTA
GATGACATGA AGGCCCAAGC TGCGGTGGCC GAAGCCAACG CCTTTTTAAA TGATGAAACC
CGTAAACTCA GGGAATTTGA AAAACTCATC AGCCGCAACG CCATCACCCA AACAGAAATT
GATGCGCAAA AGGCCAGTGT CGATATAGCC AGAGCACGAC TCGCCTCGGC GCAGGCAGAC
TTACATTATC ATTCACTGAT CGCTCCCTTT GCCGGCAAAA CCGGGCTGAT TAACTTCAGC
GAAGGTAAAA TGGTCAGCAT AGGCACTGAG CTGATGACCT TGGATGACTT ATCCAGCATG
CGACTCGACC TACAGGTGCC CGAGCATTTT CTGTCACAGT TAAGTATTGG TATGCCAGTC
TCGGCCACCA GCCGCGCTTG GCCAGGTGAA ACCTTTATCG GCAAAGTGAT CGCTATCGAT
CCCCGCGTGA ATGAAGAAAC CTTAAACTTG AAGGTCCGCG TACAATTTGA AAACGCGAAA
AACCGCTTAA AACCCGGCAT GATGATGTCA TCGACCATCA CCTTCCCACC GATTTCCGCC
CCAATTGTGC CAGTACAAGC CTTAGAATAT TCAGGCACTA AGCGCTATGT GTATGTGGTT
GGCGAGGATA AAATCGCCCA TCGCACCGAA GTGGTTTTAG GCGCACGTGT GGGTGACCAA
GTGCTTATCG ATTCTGGCCT AAAGATTGGC GACAAAGTCG TGGTGCAAGG GCTAGTAAAT
ATGCGCGATG GCTTAAAGAT CAATGAAGTC GTGCTCGAAG CTAAGAACGA CGCTAATCGT
CCTGCGGCCA AGTCAGACGT CAACACTGCG GAGACGAAAT AA
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| Protein sequence | MIPMKKTIIA IALVAAVAAA VSFSDVLQAA KPESAPHLMR TVPVVTGEVV EHPLTQSISL
IGKLAADRAV VIAPQVTGKI KQIAVTSNQA VKKGQLLIEL DDMKAQAAVA EANAFLNDET
RKLREFEKLI SRNAITQTEI DAQKASVDIA RARLASAQAD LHYHSLIAPF AGKTGLINFS
EGKMVSIGTE LMTLDDLSSM RLDLQVPEHF LSQLSIGMPV SATSRAWPGE TFIGKVIAID
PRVNEETLNL KVRVQFENAK NRLKPGMMMS STITFPPISA PIVPVQALEY SGTKRYVYVV
GEDKIAHRTE VVLGARVGDQ VLIDSGLKIG DKVVVQGLVN MRDGLKINEV VLEAKNDANR
PAAKSDVNTA ETK
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