Gene Shewmr7_1148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1148 
Symbol 
ID4257793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1333225 
End bp1333698 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content48% 
IMG OID638121769 
Producthypothetical protein 
Protein accessionYP_737204 
Protein GI114046654 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.882158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.661089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAAAA TTGCCCTGTT TGTCGACGTA CAAAACATCT ACTACACCTG CCGTGAGGCT 
TATCAGCGCC AGTTTAACTA TCGCAAACTC TGGCAACAGT TAAGTACGCA GGGTGAGATT
GTCAGTGCCA TTGCCTATGC CATTCACCGC GGGGACGATG GTCAGTTAAA GTTTCAAGAT
GCGTTGAGAC ATATTGGTTT TGAGCTTAAA CTTAAGCCCT TTATTCAGCG CAGTGATGGT
TCGGCAAAGG GTGATTGGGA TGTGGGCATC ACCATAGATG TACTGGAAAT GGCGCCCGAG
GTGGATACAG TTATCTTGCT GTCTGGCGAT GGGGACTTTG CCCTCTTGCT CGATAAGATA
AGGCAAAAAT ACGCCGTCGA GGCTGAGGTG TATGGCGTGC CCTCCCTCAC CGCAAAATCT
CTGATGGATG CTGCCACACA GTTTATTCCT ATCACTCCCG ATTTACTGCT CTAA
 
Protein sequence
MKKIALFVDV QNIYYTCREA YQRQFNYRKL WQQLSTQGEI VSAIAYAIHR GDDGQLKFQD 
ALRHIGFELK LKPFIQRSDG SAKGDWDVGI TIDVLEMAPE VDTVILLSGD GDFALLLDKI
RQKYAVEAEV YGVPSLTAKS LMDAATQFIP ITPDLLL