Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1147 |
Symbol | |
ID | 4257792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1331936 |
End bp | 1333204 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638121768 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_737203 |
Protein GI | 114046653 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.837057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.460355 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCTT TTCAGCCTCA GGAAATCAGT ATCAAAATTG ATGTTCGGCA TGCGTTGTTA GCCGTGGCGA CGGCATTGGA TTTTGTCGGC GTGGATGATT TACACCACGG TCATCGAGTG GCCTATATGG CCTATGAATG CGCCAATGTG TTGGGTTGGT CAGATGAAAA GAAGCAGTTT GCCTATTTTG CGGGGCTTAT CCATGACTGC GGCGTGTCTT CCTCCGAGGA GCATTTACGC CTACTCAAAT TAATGCAGCC AGAAGATGCC ACCTCCCACA GCCGCCGTGG GTATGAGGCC TTAATGAAAT GCCCCATACT TGACCGTTTC GCCTTAATCG TACTGTATCA CCACACTCCT TGGCTTGAGC TGCAAACCCT GCATATTCCT GAGTTTGATC GTGATCTTGC TGCATTGGTG TTTCTGGCCG ATCGGACCGA TTTTCTGCGG GCGCGCTATA CCCATGGTTG TCACCAAGAG CTAATTACCC TCCATGAAGG GTTGGTTGCG GATAATTTGC TAGCCCATAG TGGCGTGCTC TTCGAGCCTA ATATGGTGGC GGCCATGTGC CAATTAGTCA GTAAAGACGG CTTTTGGTAC AACATGGAGG CTGTCCATAT CGAGCAAATG GCCCTCGAGT TTGAAGCGAA TCAACTGTAC GACAAACAGC TTGATCTCGA AGGCGTTAAG CAGATATCAA GATTTTTGGC ACGGATTGTC GATGCCAAGA GTCCCTTTAC TTTTCATCAT TCGGACAAGG TCGCACTGTT GGCAAAACTG GTCGCTAAGG ATTGTGGCAT ATCGGATACC GATGCCGAGT TATTGTATGT GGCTGGGCTG TTACACGATG TTGGCAAGCT CAAAACCCCC GATTTATTAC TCCATAAGGA AGGCAAGCTG ACCAAGGAGG AATACTCAAT TATGAAGCGT CACACCGTCG ATACCGACCA CACCTTAAAG AGCTTTTTTC CTAAGTCTGT TATTGGTGAG TGGGCGTCAA ACCACCATGA GCGTCTCGAT GGCTCGGGTT ATCCCTTTAG AAAAAGACAA GAACAGTTAG ATTTACCTTC GCGGATCCTT GCACTCGTCG ATGTGTTTCA AGCCTTAACC CAAAAGCGAC CCTACCGTGG CTCCCTGTCC TTAAGTGAGG TGCTGGACAT TATGTTGCCA ATGGTTCAAC AGGGTAAGTT GGACTCGAAC GTTTATGATG TATTGCTAGC CGATGCCGAT AACTTTTATC AACTCTCGAC ACAAGAGTAC GAGGTTTAG
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Protein sequence | MNAFQPQEIS IKIDVRHALL AVATALDFVG VDDLHHGHRV AYMAYECANV LGWSDEKKQF AYFAGLIHDC GVSSSEEHLR LLKLMQPEDA TSHSRRGYEA LMKCPILDRF ALIVLYHHTP WLELQTLHIP EFDRDLAALV FLADRTDFLR ARYTHGCHQE LITLHEGLVA DNLLAHSGVL FEPNMVAAMC QLVSKDGFWY NMEAVHIEQM ALEFEANQLY DKQLDLEGVK QISRFLARIV DAKSPFTFHH SDKVALLAKL VAKDCGISDT DAELLYVAGL LHDVGKLKTP DLLLHKEGKL TKEEYSIMKR HTVDTDHTLK SFFPKSVIGE WASNHHERLD GSGYPFRKRQ EQLDLPSRIL ALVDVFQALT QKRPYRGSLS LSEVLDIMLP MVQQGKLDSN VYDVLLADAD NFYQLSTQEY EV
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