| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1137 |
|---|
| Symbol | |
|---|
| ID | 4256737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 1319547 |
|---|
| End bp | 1320386 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638121758 |
|---|
| Product | putative signal transduction protein |
|---|
| Protein accession | YP_737193 |
|---|
| Protein GI | 114046643 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1639] Predicted signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.779758 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACCG AACATCTACT GTTAGTCGGA TTACTCAAAA AATTAAAAGA TGATGCTTTA
GTGCTGCCAA CCCTGCCTGA AGTAGCCATG CGGGTACAAG AAGTGGTGAG TCGCTCCGAT
GCGAGCCTAA AGCAAGTGGC TGAGGTGATC GGTCAAGATG CGGCGATTTC GGCGCGTATT
ATTAAAGTCG CCAACAGTGC TTTGTATAGC CGTGGCATTC CCGCCGAGAG CATTAATAGT
GCGGTCTCCC GTATCGGTTT AATCCAAATT AAGAGTATTG CGACCTCAGT GGCGATGGAG
CAGCTCTTTA TTTCTACCAA TGAAATGGTA TGGGAAGTGA TGGATGAAGT GTGGCGCACC
TCGATTGAGG TAACGGCCGC CGCCTGCGCC ATGTTGCAAA TGTACAATAA GCGTCACCCC
GGTCAGCTCA ATCTCGATAC CTTAACATTG GCAGGTCTAG TCCATAATAT CGGTGCATTA
CCAGTACTGA CCGAAGCCGA AGCCCATCCA GAGTTATTCA CTAGCATTGA TCAATTGCGC
TCTTTAGTAC GTAAAATGCA AGGTCCATTA GGACGCGCAG TGTTAAAGAG TTGGGCTTTT
GCGCCAGAGG TGATGGAAGT GGTTGAGCGT TGGGCGGATT TACCTTATCT GCCGGACCAT
GTCACTTATT TAGATTTTAT CCGTGCCGCT GCCTTTTACA CCGGAGAGTT ACGTGCCGGT
GCCGATTTTG AGCAACGGAT GGAAGTCTTT GTGAGTCGTG GTTTACCCGT TTCGGCGAGT
GATTTAGCGA GTGATGAATT TATGGATAAA TTCCATTCAA TCAGAGAGAG TTACCAGTAG
|
|---|
| Protein sequence | MSTEHLLLVG LLKKLKDDAL VLPTLPEVAM RVQEVVSRSD ASLKQVAEVI GQDAAISARI
IKVANSALYS RGIPAESINS AVSRIGLIQI KSIATSVAME QLFISTNEMV WEVMDEVWRT
SIEVTAAACA MLQMYNKRHP GQLNLDTLTL AGLVHNIGAL PVLTEAEAHP ELFTSIDQLR
SLVRKMQGPL GRAVLKSWAF APEVMEVVER WADLPYLPDH VTYLDFIRAA AFYTGELRAG
ADFEQRMEVF VSRGLPVSAS DLASDEFMDK FHSIRESYQ
|
|---|
| |