Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1136 |
Symbol | |
ID | 4256736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1317831 |
End bp | 1319195 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121757 |
Product | peptidase U32 |
Protein accession | YP_737192 |
Protein GI | 114046642 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAAC CTGAGTTGTT ATCTCCCGCT GGGACGCTGA AAAACATGCG TTACGCTTTT GCCTATGGTG CAGATGCCGT GTATGCCGGC CAGCCGAGAT ACAGCCTGAG GGTTCGTAAT AACGACTTTA AAATGGAAAA CCTCGCAACG GGTATCGAAG AAGCCCATGC GTTAGGTAAA AAGCTTTATG TGGTGAGTAA CATTGCTCCC CACAACGCCA AGCTCAAAAC CTATATCAAA GATATGGAAC CGGTAGTCGC GATGAAGCCC GATGCGCTGA TCATGTCAGA CCCAGGTTTA ATCATGATGG TGCGTGAGGC CTTCCCTGAG CAGGTGGTGC ATTTATCGGT GCAAGCCAAC GCTATTAACT GGGCGTCGGT TAAATTCTGG CAGACTCAAG GCATTAAACG GGTGATTTTA TCCCGCGAAT TATCCTTAGA TGAAATCGAA GAAATCCGTC AACGCTGCCC CGATATCGAG TTAGAAGTGT TTGTCCACGG CGCCCTGTGT ATGGCTTACT CTGGTCGTTG TTTGCTGTCG GGTTATATCA ATAAGCGCGA TCCAAACCAA GGCACTTGCA CTAACGCCTG CCGCTGGAAA TACGACGTGC ACGAAGCGCA GCAAACTGAC TCTGGCGATA TCATTGCCAC CCCCAATGCG GTGCAAATCG AGACGCCAAC CTTAGGCACG GGTCCTGCGA CCGACCAAAT CTTCCTGCTG CAAGAGGCCA ATCGCCCCGG CGAATACATG CCAGCGTTTG AAGATGAGCA TGGCACTTAT ATCATGAACT CTAAGGACTT GCGCGCAATC CAACACGTTG AGCGTTTGGC GAAAATGGGC ATCGACTCGC TGAAGATCGA AGGCCGTACT AAGTCGTTCT ACTATGTTGC CCGTACCGCC CAGCTATACC GTCAGGCCAT CGACGATGCA GCCTCAGGCA AGAGCTTCGA TCGCAGCCTG ATGAACCAAC TCGAAGGCTT AGCCCACCGT GGCTATACCG AAGGTTTCTT ACGTCGCCAC GTACATGATG AATATCAAAA CTACGACTAT GGTTACTCGG TAAGCGATAC CCAACAGTTT GTGGGTGAAT TAACCGGTAA ACGCAATCTG GCTGGCCTTG CCGAAATCGA AGTGAAGAAC AAATTCTCTG TCGGTGATAG TGTTGAATTA ATGACGCCAC AGGGCAATAT CAGCCTCACC ATAGAGCAAC TCGAGAACCG CAAAGCCGAA TCGGTTGAAG CGGGATTAGG TTCGGGCCAT ACCGTTTACT TGCCCGTGCC GAAAGAGGTT GATCTGAACC ACGGCATTTT ACTGCGTAAC CTGCCCCAAG GTCAGGATAC CCGCAACCCA CACGAAGCAG GCTAA
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Protein sequence | MFKPELLSPA GTLKNMRYAF AYGADAVYAG QPRYSLRVRN NDFKMENLAT GIEEAHALGK KLYVVSNIAP HNAKLKTYIK DMEPVVAMKP DALIMSDPGL IMMVREAFPE QVVHLSVQAN AINWASVKFW QTQGIKRVIL SRELSLDEIE EIRQRCPDIE LEVFVHGALC MAYSGRCLLS GYINKRDPNQ GTCTNACRWK YDVHEAQQTD SGDIIATPNA VQIETPTLGT GPATDQIFLL QEANRPGEYM PAFEDEHGTY IMNSKDLRAI QHVERLAKMG IDSLKIEGRT KSFYYVARTA QLYRQAIDDA ASGKSFDRSL MNQLEGLAHR GYTEGFLRRH VHDEYQNYDY GYSVSDTQQF VGELTGKRNL AGLAEIEVKN KFSVGDSVEL MTPQGNISLT IEQLENRKAE SVEAGLGSGH TVYLPVPKEV DLNHGILLRN LPQGQDTRNP HEAG
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