| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1133 |
|---|
| Symbol | |
|---|
| ID | 4256733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 1315812 |
|---|
| End bp | 1316813 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638121754 |
|---|
| Product | peptidase U32 |
|---|
| Protein accession | YP_737189 |
|---|
| Protein GI | 114046639 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0867416 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTGT TGTGTCCAGC AGGAAACCTG GCCTCGCTAA AGTCGGCGCT GCAGGCCGGA
GCCGATGCTG TCTACCTTGG GTTGAAGGAT GATACCAATG CACGTTCATT CGCGGGCTTA
AACTTCACCC CCGCAAAATT ACAGGAAGCC GCCGAGCTGA CCCATCAGCG GGGCAAGAAA
ATCTTCCTTA CCCTAAATAC CTTTCCTAAG CCGAATGAGG AACATCGCTG GTATCAAGCC
ATCGACTTGG CGGCCAGCAT TGGCGTCGAC GCCTTAATCG TGGCCGATCT GTCGCTGCTC
GACTATGCCC ACAGGCAATA TCCGCATATT CCGCTGCATT TATCGGTACA GGCGAGCGCC
ACCAACTTGG GCGCACTGAG CTTTTATAAA GAGGCTTTTA ATATCGCGCG GGTGGTATTA
CCCAGAGTGC TGTCGATGAA ACAAGTGCGC GACCTCGCCA AGGTCAGCCC GGTCGATTTA
GAGGTCTTTG CCTTTGGCAG TCTGTGTATT ATGGCCGAAG GCCGCTGCCA CTTATCCTCC
TATGTCACCG GTCAATCGCC AAACACTGGC GGCTCTTGCT CGCCAGCGAA ACACGTGCGC
TGGCAGGAAC AGGGCCAAGA CAGATTGACT CGCCTCAATG AGGTCTTGAT TGATAAGTCA
GGGCTCGATG AACAAATGGG TTACCCTGTG GTGTGTAAAG GCCGCTATCT CACCCAAGAC
GATGATCAAC CGCAATATCT GCTCGAGTCT CCCACAAGTT TAAATACCCT TAGCTTACTG
CCTGAGCTTG CCAAGGCGGG CATAGTGTCA CTCAAGATTG AGGGGCGTCA GCGCAGCCCT
GCCTATGTAG AACAGGTGAC CAAGGTTTGG CGTCAAGCGA TTGATACTTA TCTTAATCAT
CCAGATAAAT TCCAGACTCA GGCCCATTGG GAGCAAGCCC TCGCGAAAGT CTCCGAAGGC
CAAATTACCA CCTTAGGCGC CTACGAGCGT GACTGGCAAT AG
|
|---|
| Protein sequence | MELLCPAGNL ASLKSALQAG ADAVYLGLKD DTNARSFAGL NFTPAKLQEA AELTHQRGKK
IFLTLNTFPK PNEEHRWYQA IDLAASIGVD ALIVADLSLL DYAHRQYPHI PLHLSVQASA
TNLGALSFYK EAFNIARVVL PRVLSMKQVR DLAKVSPVDL EVFAFGSLCI MAEGRCHLSS
YVTGQSPNTG GSCSPAKHVR WQEQGQDRLT RLNEVLIDKS GLDEQMGYPV VCKGRYLTQD
DDQPQYLLES PTSLNTLSLL PELAKAGIVS LKIEGRQRSP AYVEQVTKVW RQAIDTYLNH
PDKFQTQAHW EQALAKVSEG QITTLGAYER DWQ
|
|---|
| |